Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4243 |
Symbol | |
ID | 8728002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5119839 |
End bp | 5120576 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389026 |
Protein GI | 284039096 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.927259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGAA TTGTTCACAA GCACCCGCTG GCCATTCGCT GGTTTCACTG GATCAACTTC CCGGTTTTGT TCGTCATGAT CTGGAGCGGG CTGTTGATCT ACTGGGCGTA TGACCCCTAC AAAATCACTA TTGGTAGTTA TACGCTCGTT TCGTTCTTCC CGGATGGCTT TTACAAATTC CTGAAGGTTC CGCGCCGACT GGCCGAAGGG ATGGCATGGC ACTGGGTATT CATGTGGCTG TTTATGCTCA ACGGACTGGC GTATGTGATT TACACCTTTG CCTCGGGCGA ATGGCGGCAT CTGGTACCCA ACCGAAATTC GTTTCGCGAA GCCATTCAGG TAACGCTTTA TGACCTCGGC CTTCGGAAAA CGCAGCCATC TTTTGTCAAA TATAATGGCG CGCAGAAAAT TGCCTATTTC TCGATTATGC TCATGGGCGT TGGCTCCATA CTGACGGGCT TTGCGATCTA CAAACCCACT CAGTTTTCGT GGCTCACCAG CTTACTGGGA GGCTACAAAG CGGCCCGACT GGAGCATTTT GTTCTAACCG TCGGTTATGT ACTTTTCTTC TTTGTCCACA TCGGTCAGGT AATCCGGGCT GGCTGGAACA ATTTCCAGTC CATGATAACG GGTTTTGAGG TTATCAAACG AAACGACCCC AAACAGCCTT CGGTAACACC CGACCCCATC AGCGAACCCA TAGAACCTAC TCCAACGCCT ACCCCACTTG TAGCATGA
|
Protein sequence | MKRIVHKHPL AIRWFHWINF PVLFVMIWSG LLIYWAYDPY KITIGSYTLV SFFPDGFYKF LKVPRRLAEG MAWHWVFMWL FMLNGLAYVI YTFASGEWRH LVPNRNSFRE AIQVTLYDLG LRKTQPSFVK YNGAQKIAYF SIMLMGVGSI LTGFAIYKPT QFSWLTSLLG GYKAARLEHF VLTVGYVLFF FVHIGQVIRA GWNNFQSMIT GFEVIKRNDP KQPSVTPDPI SEPIEPTPTP TPLVA
|
| |