| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4218 |
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| Symbol | |
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| ID | 8727977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5079379 |
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| End bp | 5081745 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003389002 |
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| Protein GI | 284039072 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.243285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.953666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGAC TACTACTCAG CTTATCACTA CTTGTCCTGT TGACATCGGG AGTACGCGCT
CAGACTGCCC AGCAATGTGC TACGATGGAG ATGGATAGTC TGCTCCGCGC TCGTCATCCT
GAGTTGGGCA CCCTCAACGA CTTTGAGCGG GCGTTGCAGC GTAAAATGGT CGAGATCAAA
AAACAGATGG CTAGTGGCCG GGTAGGTTTA GCGACGGTCA TTACCATTCC CGTTGTGATC
CACGTCGTGC ATAACGGCGA AGCGGTTGGT TCGGGGCGCA ACATCAGCCG GGCACAGGTG
CAGGCGCAGC TTACCACACT CAACGAAGAT TTTCGGCGGA AGGCCGGTAC GCGGGGGTTC
AACGACAACC CACTAGGTGC CGATATTGAA ATCGAATTCT GCCCAGCCAT CGTCAATCCA
CAGGGGCAGT CGATGGCTGA GCCGGGTATT GACCGCTACA ATGGCAACCG GGCCAACTGG
AACCGAAACG ACATTGAAGG TATCCTCAAA CCCAGCAGCT ACTGGAATCC CGACAAATAT
TATAACATCT GGGTTGTCGA CCTGAACGAT GCCGTAGCCG GAGGTGGTCA GCTATTGGGG
TATGCCCAGT TTCCGAGCCA GTCGAATTTG CCCGGTATCC CGAGCGAAGG CCCGGCCAGT
ACGGATGGTG TCGTGATCGA CTACCGCTCC TTTGGCAATG TCGAGAAAGG GACCTTCCCC
ACCATGCGCG ATACGTATAA CCTTGGTCGT ACATTATCAC ACGAAACGGG CCACTGGTTT
GGTCTTCGTC ACATCTGGGG TGATGCGAAC TGCGGTGACG ACTTTTGCGC CGATACGCCC
CCGCAGGCAT CGGAGAGCCG AGGTTGCCCG GTTGGTCGGG TGAGTTGCGG ATCGACTAAT
ATGGTGCAGA ACTACATGGA TTACTCCAAC GATGCCTGCA TGAATATTTT TACCCTAAAT
CAGAAAGATC GAATTCGGGC CGTTATGGCA CTTAGTCCCC GGCGGGTAAG TCTTTTATCA
TCCAATGTGT GTGGTACGCT GGTGGCCGTT CGGCCGGTGT CGAACTTCCG CGCCGATAAT
CAGCAGGTAT TATTAGGCGG CCAGATTAAG TTCAACGACC TCTCGGATGG ATTCCCGACG
AGCTGGTCCT GGACGTTCGA GGGAGGCACG CCATCTACCT CAACGGAGCA GAATCCCGTT
GTTACGTATA CCCAGCCGGG TAAGTTTAAG GTAACGCTGG TCACGTCCAA TGCCATTGGG
CAGTCGGACC CGGTTACGCG TACCGAATAC ATTGAAGTGC TCAACCAGGG GCTTTGCAAT
ACGGTCAAGA ACTTTGATGG AACGCCAACG GTGTTACGTG AAGTGGGCGG AACCGGTTAT
GTAGCCGGGC AGAACAGCCG CCGGAGTAAA GCCGTATCGG AGTTTTTTGC CAATAAGCTG
GGCTATACAA ATCTGGCTGG AGCATCGCTT AAGTTTGGGG TGGCTAAGGC TGCCAGGGGA
GCCTCTACCG AATCGGTAGT GACGGTAACC GTCTGGAACG GACGCGGTTT TCAAGGTGGC
CCCGGTGCTG TGCTGGGAGA AAAAGACGTA CCTCTCCGTA CCATTCTGGA CGATGTCGCC
AACAACCGCC CAACTACCGT TACCTTCGAC AAAAATGTGC CGGTAAGCGG ACTGGGTTTC
CATGTGGGGG TTACGTTCCC GTACGCTACC GGCGATACCA TTGCTGTTTT CACGACGAAA
AATGGTGAGT CTCTTGCGGC AACCTCCTGG CGGCAGAACC AGCAGGGCAA CTGGCTCCGG
TATGCCGACA GTCTGGGGCT GAACGTAGCG CATAACATTG TGGCCAACGT GGGCCAGAAA
CCATCGGTAC AAATAGCGGC ATCGTCGCTG TTCATTAGTC CGGGCGAAAC CGTTACCTTG
AATGCCCGTG GAGCGGGTAT CTACAACTGG GTTGGCACTG GGCTGAACAC CACCCTAGGG
CCGCAGGTAC TAGCCTCACC CACTCAGACC ACGTCGTATA CCGTTACCGG TTCAGGCCTG
GACCTGTGTA GCACCACGGC CGTGGTAACG ATCAACGTGC GGGCAGGAAC CGTCACGGCG
AATACGCCCC TGGCCGAACA GGCGCTACAG GTAACGCCCA ACCCTAGCGA CGGGCAGATG
ATGGTGCTCT TCAGTGGTCC GCAACGGGGC ACACTTACGC TGGGCGTGCG TAACCTGACA
GGTGTAGAAC TTTCCCGACA AAATCACCAG AAAACCGCTG ACCTCTTCCA GCAAACGCTC
GATATAAAAA CGGCCCCGCC CGGCGTGTAT TTCATCGAGG TCAGGATAGG CGAACAGGTA
TTCAGACGAC GGATTGTGAA GCAGTAG
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| Protein sequence | MFRLLLSLSL LVLLTSGVRA QTAQQCATME MDSLLRARHP ELGTLNDFER ALQRKMVEIK
KQMASGRVGL ATVITIPVVI HVVHNGEAVG SGRNISRAQV QAQLTTLNED FRRKAGTRGF
NDNPLGADIE IEFCPAIVNP QGQSMAEPGI DRYNGNRANW NRNDIEGILK PSSYWNPDKY
YNIWVVDLND AVAGGGQLLG YAQFPSQSNL PGIPSEGPAS TDGVVIDYRS FGNVEKGTFP
TMRDTYNLGR TLSHETGHWF GLRHIWGDAN CGDDFCADTP PQASESRGCP VGRVSCGSTN
MVQNYMDYSN DACMNIFTLN QKDRIRAVMA LSPRRVSLLS SNVCGTLVAV RPVSNFRADN
QQVLLGGQIK FNDLSDGFPT SWSWTFEGGT PSTSTEQNPV VTYTQPGKFK VTLVTSNAIG
QSDPVTRTEY IEVLNQGLCN TVKNFDGTPT VLREVGGTGY VAGQNSRRSK AVSEFFANKL
GYTNLAGASL KFGVAKAARG ASTESVVTVT VWNGRGFQGG PGAVLGEKDV PLRTILDDVA
NNRPTTVTFD KNVPVSGLGF HVGVTFPYAT GDTIAVFTTK NGESLAATSW RQNQQGNWLR
YADSLGLNVA HNIVANVGQK PSVQIAASSL FISPGETVTL NARGAGIYNW VGTGLNTTLG
PQVLASPTQT TSYTVTGSGL DLCSTTAVVT INVRAGTVTA NTPLAEQALQ VTPNPSDGQM
MVLFSGPQRG TLTLGVRNLT GVELSRQNHQ KTADLFQQTL DIKTAPPGVY FIEVRIGEQV
FRRRIVKQ
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