Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4175 |
Symbol | |
ID | 8727934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5026235 |
End bp | 5026663 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_003388960 |
Protein GI | 284039030 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.115684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.217093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCGA AAAAAGCAAA ATACGCCATC AAAGCCCTTA AAGCACTAAC CGAATCCTAC GGGAGCGGTC CTATTCTGAT TACGGACATC GCTAAACGCG AGAACATCCC TCATAAATTT CTGGAGGGCA TTCTTTTAGA AATGCGTAAT CATGGCATCC TGCAAAGTCA GAAAGGCAAA GGGGGCGGGT ATCTGTTGCG GGTAGATCCC GAACGCATCA ATCTGGCTCA GGTAATCCGG ATCATTGATG GGCCCATTGC GCCTACCCCC TGTGTTTCGC TGAACTTCTA CGTGCGTTGC GACGACTGCG CCGACGAAGA GACTTGTTCC ATCCGCCCAA TTATGCTTCG CGTTCGTGAT GCCAATCTGG CCGTTTATGA AAAAACAACC ATTCAAATGC TGGTGGATAA AAACAAACAA CCCATCTAA
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Protein sequence | MISKKAKYAI KALKALTESY GSGPILITDI AKRENIPHKF LEGILLEMRN HGILQSQKGK GGGYLLRVDP ERINLAQVIR IIDGPIAPTP CVSLNFYVRC DDCADEETCS IRPIMLRVRD ANLAVYEKTT IQMLVDKNKQ PI
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