Gene Slin_4155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4155 
Symbol 
ID8727914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5004871 
End bp5005791 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content56% 
IMG OID 
ProductBeta-aspartyl-peptidase 
Protein accessionYP_003388941 
Protein GI284039011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACTA TTGCCATACA CGGTGGCTCA GGAACCATTA ATCGGGACGA AATCACACCA 
GAGCAGGAAA ACGCTTTTCG GCGGGGGCTG GAGGCCGCTT TAGATGCCGG GTATACAATT
CTGAACCGGG GCGGCAGCGC CCTCGATGCC GTGGAACAGG CTGTCCGTAG TCTGGAAGAA
AACGAACTCT TCAATGCGGG CAGAGGGGCC GTGTTTGCCG CCAGTGGTAA GCACGAAATG
GACGCGTCGA TCATGTGCGG CCAGTCGCTC AAAGCGGGGG CCGTGGCCGG TGTGACGAAC
ATCCGGAATC CAATCTCACT GGCCAGGGCG GTCATGGAAC AATCCGAAAA TGTCTTTCTG
CTGGCGAGTG GTGCCGAGGA CTTCGCCCGT GAGCATAAAC TGACGTTTGA GCCGGACGAG
TACTTCTTTA CCGAACTGCG GTCTCAACAG CTCAAAGAAG CGCAGGAGGC CAATAAAACG
CAGCTGGATC ATAGCAAACG CAATACCGGC AAAGGGACCG TTGGCGCGGT GGCGCTCGAT
CAGGACGGTA ATCTGGCGTC GGCTACGTCT ACCGGCGGCC TGACGAACAA AAAGTACGGA
CGTGTTGGCG ATACGCCCGT AATCGGGGCC GGAACCTACG CCAACAACCA GACCTGCGCG
GTATCGTGTA CGGGCTATGG TGAGTTTTTT ATCCGGTCGG TGGTGGCGCA CGATATTTCC
TGCCTGATGG AGTACAAAGG CCTGTCGTTG AAAAAAGCCT GTGCGTATGT TGTGCAGGAT
AAGTTAAAAA CGATGGGTGG CGAAGGCGGG CTGATTGCCG TTGATCGGGC CGGAAACGTT
GAATTGCCCT TCAATTCGGA AGGCATGTAC CGGGGCTGGC GCAACGATGT CGGCGAGGGT
GAAATCGCAA TTTTCGCCTG A
 
Protein sequence
MYTIAIHGGS GTINRDEITP EQENAFRRGL EAALDAGYTI LNRGGSALDA VEQAVRSLEE 
NELFNAGRGA VFAASGKHEM DASIMCGQSL KAGAVAGVTN IRNPISLARA VMEQSENVFL
LASGAEDFAR EHKLTFEPDE YFFTELRSQQ LKEAQEANKT QLDHSKRNTG KGTVGAVALD
QDGNLASATS TGGLTNKKYG RVGDTPVIGA GTYANNQTCA VSCTGYGEFF IRSVVAHDIS
CLMEYKGLSL KKACAYVVQD KLKTMGGEGG LIAVDRAGNV ELPFNSEGMY RGWRNDVGEG
EIAIFA