Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4077 |
Symbol | |
ID | 8727835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4905777 |
End bp | 4907111 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003388863 |
Protein GI | 284038933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.771769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.484559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAA TTAGGCTCAA CGAATTTAAC CACCAACAAG GCTTGCTAAA CGACCTTCAA CAGAAAGAAA AACAACTGGC CGTTATCGGG TTGGGCTACG TGGGCCTACC GATAGCGCTG GCCTTTGCCC AACGGTTTCG GGTGGTGGGC TTCGATACCA ACGCCGAACG GGTGGCTATG CTGCAACGGC ACGAAGATCC ATCGCGTCAG CTAAAGCCCG GCGATTTTAC CGGGGCCGAT ATCCGGTTTA CCGCTAATCC CGATGACCTC CGAAACGCCC ATTTTTTTGT TGTGGCGGTG CCTACACCGG TCGATGAGTA CAAAGTCCCC GATCTGAAAC CCCTGCAACG GGCGTCCGAA ATCATTGGTC GTGTCCTGAA ACCCGGCGAC TACGTCGTCT ATGAGTCTAC CGTTTACCCC GGCTGTACCG AAGACGATTG CCTGCCGCTG CTGGAACAGT ATTCCGGCCT GAAGCTGGGT GATGACTTTA AGCTGGGCTA CTCGCCGGAA CGGATCAACC CCGGCGATAA GGTTCGAACG CTGACCGATA TACTAAAAGT AGTGTCGGGT AACGATGCCG AAGCAGTGCA GACAATTGCT GATGTATACG GCAGTATCAT CCGGGCCGGT ATATACGCTG CGACCTCCAT TAAGGTTGCC GAAGCAGCCA AGGTCATCGA AAATGTTCAG CGGGATCTCA ACATATCGCT GATGAATGAA TTGGCGGTCA TTTTTGACAA AATGAGTATC GACACGCAGG AGGTACTGAA AGCTGCGTCG ACGAAATGGA ATTTTTTGCC GTTTACGCCG GGGCTGGTCG GCGGGCATTG TATTGGCATT GACCCCTATT ACCTTCTTTA CAAATCGCGG CAGCTGGGTT ATGAACCGCA GGTAATCAAC TCGGGTCGGC GCGTCAACGA CAGTATGCCC GCTTTTGTGG CCACCAAGCT GGTTCAGCTG TTGCTCCAGC GCGAGAAGAA TCCGGCGCAG ACTAAAGTAC TGGTCATGGG CCTCACATTC AAGGAAAACA TTGCCGACAT CCGCAACTCG AAAGTAGTCG ACCTGGTGCG GGAGCTGATG AAATACGCCA TCAACGTTCA TATCGTTGAT CCGTGCGCGT CGCCGAACGA AGTAGCGCTC GACTACAAAA TGACCCTGCT GGATGCACCG GTCGGCCGGT ACGACGCCGT CATTGTTGCC GTTGCCCACG ACCAGTATCG CACACTGGAT GTGGTCTATT TTAAGTCGCT GATGACGGAG CGGCCGATTT TACTGGATTT GAAGGGATTG TATACCATAG GCCGGGAAGA TGATCTAACC TACTGGCGAT TATAA
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Protein sequence | MFKIRLNEFN HQQGLLNDLQ QKEKQLAVIG LGYVGLPIAL AFAQRFRVVG FDTNAERVAM LQRHEDPSRQ LKPGDFTGAD IRFTANPDDL RNAHFFVVAV PTPVDEYKVP DLKPLQRASE IIGRVLKPGD YVVYESTVYP GCTEDDCLPL LEQYSGLKLG DDFKLGYSPE RINPGDKVRT LTDILKVVSG NDAEAVQTIA DVYGSIIRAG IYAATSIKVA EAAKVIENVQ RDLNISLMNE LAVIFDKMSI DTQEVLKAAS TKWNFLPFTP GLVGGHCIGI DPYYLLYKSR QLGYEPQVIN SGRRVNDSMP AFVATKLVQL LLQREKNPAQ TKVLVMGLTF KENIADIRNS KVVDLVRELM KYAINVHIVD PCASPNEVAL DYKMTLLDAP VGRYDAVIVA VAHDQYRTLD VVYFKSLMTE RPILLDLKGL YTIGREDDLT YWRL
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