| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4061 |
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| Symbol | |
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| ID | 8727819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4882338 |
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| End bp | 4886393 |
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| Gene Length | 4056 bp |
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| Protein Length | 1351 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003388847 |
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| Protein GI | 284038917 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0111461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAC TGTACATATT AATGTGCTTT TGGGTTATTG TGGGTAGTTG GAATACCGTA
CATGCTCAAA TAAGTGGAAG TGTATTCAGA GACTTTGATT TAAATGGTAT CCGTTCAGAC
ACATTACCCA TTGAGATCGG TGTAGCGGGT GTTGACGTTT TCGCATTCGT TGATCTGAAC
AAAGTGCCAA TTCGGAAAGC TACGGACGCA AAAGGAAACT ATTCATTTAG TTCGTCCGAA
ATTCCGGCTG GGAAACCGGT ACGCATCGAG TTTCATAACT TGCCTCCGGG CGACTATAAT
GGCCCTTATG GCAGTAGTAG TGCAACAAGT GTTCAGTTTA TAAAGGCGCC TTCCAGTCAT
GTAAATGTTG GTATCAATTA TCCAGCCGAT TACTGTCAGC GTACAAATGT TCGACTCATT
GTACCTTGTT ACGTTAATGG AAATACCCAA CTAACAACGG ATGCCAACGG TAACCCGGTT
GCCAATGAAA AGCAGGCTGC CAAAGCCGAT GCTCTGGTTA GTGTCGCTTA TGAAGCTAGT
GGCGTAGCAT CGGCCGCTAA TTTCCCGCCG GAACATATCG CTACGGCCGA TCAGATAGGC
TCTGTTTGGG GACTTGCCTA CCATCGACGG ACTAAAAAAA TACTTAGTGC CGCCTTTATC
AAACGGCACA TGAGTCTCGG TCCCTTAGGC ACGGGGGGCA TCTATATGAG TGATATCGTC
ACGCACAAAA CCACCCGTTT TCTGGATGTT AACACGCTTG GCATCGACAC TGGGGCCGAT
CCACACACAG GTTTGTTTGC CGATAAAACA CAGGCTAGTG CTGATCCCGG TGCCATGCGT
GCGGTAGGGC GGATTAGTAT TGGAGGCATG GATATGTCGG AAGATGACAA GACGCTTTAC
TTTATTAACC TGAAGGATCG TAAAATCTAC GGTGTCTTTA TCAACTCAAC GGCTGTTGCG
CCTACGTCAG CAACAGCCGT AAAATCGTGG GCAATTCCCG ATCCTGGCTG TTCCAACGGC
GATTTTCGGC CCTGGGCGCT GAAGGTTTAC CACGGTAAAA TTTACATAGG TGTGGTCTGC
TCGGCCGAAA CATCGCAACA GAAAAGCGAT TTGAGCGCAA CGATATACCG GTTCGATCCG
AACGCAGCAA CGCCCGTTTT TGAAACCGTT CTGGCCTTTC CGCTTGATTT CAGACGTGGC
CCAGCCGATC TTACGACCGA CCCTAATCAA CCCGATTACG ACTGTACCAA GTATGACCAC
TGGCTACCCT GGACCGATGC CTGGCCAACA CCCTGCGGAC TGGGCGACAG CCGTCGATTT
GTGATGTCTC CACAACCCAT CCTGTCGGAT CTCGAATTTG ACGACGATGG GTCGATGTTA
ATCGGCTTCA TGGATCGCTT CGGGAATATG TCGGGCGTAG CAAACCATAA CCCGGCTGGC
AATGGCTTAT ATGATGGATT TACGGGTGGC GATTTACTAC GAGCCTATAA CAATAATGGC
ACGCTTGAAC TGGAAAAAAA CGGCAAATCC GGTGGTCTGG CCGGTAGTGG GGTTGGCAAC
GGGGAAGGCC CTGTCGATGA AAACAACGTA GGTGGTGAGT TCTTTGGCAA TGATTATTGG
CTGTTTCACA ATAAAGTTGG TCATGCCGAA GTATCCAACG GGTCATTGAC ATTTATTCCC
GGCTACACGG AGGTAATCAC ATCGGCATTC GATCCCATCA CGGATATTTA TCAATCTGGC
GGATTCAAGG TGTTTGGTGC CAAAACAGGC TTCGTCAACC GAAATTACGT TTTATACACC
CTTGAAGAAA CGCCGGGTGT ATTCGGAAAG GCGGGGGGGC TGGGCGACGT AAAAGCCCTT
TGTGACCCGG CTTCGGTAGA AATTGGCAAC CGCTTTTGGT TCGACGACAA CCGGGATGGT
ATTCAGGACG CCTATGAACC GGGTATTGAC GGGGTTGTAC TCACGCTACA CGATATAGAA
AATGGGGGTA CAACTGTCGG TACCCAAACG ACCCACGATG GTGGACAGTT TTACTTCAAT
AACGCTACGG TGCCGGGTGG ATTACGGTAT ATGCACAAGT ACGAGATACG GATGGATACG
GCTCAATTGA GGTCACTGGA TATTACGCTC GATGGCGTCA AACCCCTGGC TGCGTCGGGC
GGTCGATTGG CTGCCCGAGC GGTAGGTGCA CGTCAGGGAG CGGCTAGTCG CCAGCGGTAT
TATGCACTTT CACCAGCCAA TCAGGCAAAC TACGCTGATG CTGATCTACG CGATTCGGAT
GCGTTACTGG TTGGTCAATC GGCCGTGATT TCTGTAACGA CGATGGATGC CGGACAGAAT
GATTTCACAA ATGACCTGTC AATCTACTCC TGCCCCGAAC TGACTACCGA GAAAGATACC
GTTTCACTTT GTCCGGGAGT AAAGCTGGAT TCCATTGCGG CCGTTGGTAA CTACCTGAGC
CGGGTCGACT CCGTACGCTT CGTCCTGTTT ACCAGCCCTC AATCAGGTAC GGCTATGTAT
GCCAATACGG GGGTTGTGTT AGGTACCGTA AAGCCCGGTC CGAACATAAA CCGGGCTGTT
TTATACAATC CACTCATCAC TACCGACAAC AACACGGGCA ATAAACGGAA TCAGTACATT
TATGCCATCA TTTATCCTAC GCCCGCCAAT GTGTCCTGTC GGCAATCGGA TAAAACAGTA
ATCAAAATCG CCCCTTCATT ACGGGCGGTG GCCACAGGGG GTACACTGAC GTGTTCGGTG
AAGAGTCTCA CCCTGAAGGG ACAGGCCCAG TACAGTGATG GCACACCCGC CCCTTCGGCG
GTTTACCGCT GGCGTGGTCC GTCCAGTTTC AGCAGTGTGG TGCAGAACCC CACGGTCTCG
GTAGCGGGCA GCTACACCCT GACGGTGGGT GACCCGGCCT GTTCCGCCAG TTTCACCACC
ACAATTACCA GCGTCACTTC GGATACCATG ACGCCCAACC TGAACACCTC GGTGGTAGGC
AAGAGCTGCC CCAGTTGTGC GGCTCGCATC TCGGCGACGG CCCCGGGGGC CAGCCTGCGC
TGGTCAGGCC CGGGCAGCTT CACGGCGGTG GGCAGTGAGG TCGATGTGGT GGTAGACGGA
CTTTACAGTG TGACGGCCAC AGGCAGCAAC GGCTGCTGGA GCACGGCCCA GGTGCTGGTG
AGCCCCAGCT ACTGTCCGGT AGTGGAACTG TCGAACTCGT CCCTGAGCTT GTGTTCGGGT
ATGAAGCTGG ACTCGATCTC GGTGCAGACC GATCATCTGC AGAATGGTGA GTCGATCCGG
TTTGTGGTGT TCAGCACCCC TCAGTCGGGT ACGGCTATGT ACGGCTCGGG CGGGGTAGTG
CTGGGTACGG TGTTGCCGGT GGGCAAGCGG GCGGTGCTGG TGCAGCCCCA GCTCAACACC
TTCAACACGG GTAGTGTTGT GCTTAAGCAG TATGTGTACG CTTTGATTTA CCCCACACCC
GGCCCAGCCG AGTGTCGGCA GTCGGATGAG CTGGTGGTGA GCGTTTCGCC CTCTGTGAAG
GCGGTGGCTA CCGGGGGGAC GCTGACGTGT TCGGTGAAGA GCCTCACCCT GAAGGGGCAG
GCCCAGTACG GCGATGGCAC ACCCGCCCCT TCGGCGGTTT ACCGCTGGCG TGGTCCGTCC
AGTTTCAGCA GTGTGGTGCA GAACCCGACG GTGTCGGTAG CGGGCAGCTA CACCCTGACG
GTGGGTGACC CTGCCTGTCC CGCTAGTTTC ACCACCGCCA CTATAAGCGT CACCTCCGAT
ACAATCGCAC CCGTTCTGCA AACGTCCGTT TCTGCTAAGT TATGTGTTAG CTGTGCTGCT
ACCATTAGTG CACAATCGCT GGGGGCTACT TTAAGTTGGA CTGGGCCTAA TGGATTTTTA
GCCACTGGCT CCAGCCAAAC CGTTACGGCC GATGGTCTTT ATACCATAAC CGCTACCGGA
GTCAATGGCT GTACCAGCCA GTCAACCGTA AACATAACCC CCTATGCCTG CCCGCCAGTT
GTGTGTCTAC CCTTCGGTAT AAGACGGATC AGGTAG
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| Protein sequence | MKQLYILMCF WVIVGSWNTV HAQISGSVFR DFDLNGIRSD TLPIEIGVAG VDVFAFVDLN
KVPIRKATDA KGNYSFSSSE IPAGKPVRIE FHNLPPGDYN GPYGSSSATS VQFIKAPSSH
VNVGINYPAD YCQRTNVRLI VPCYVNGNTQ LTTDANGNPV ANEKQAAKAD ALVSVAYEAS
GVASAANFPP EHIATADQIG SVWGLAYHRR TKKILSAAFI KRHMSLGPLG TGGIYMSDIV
THKTTRFLDV NTLGIDTGAD PHTGLFADKT QASADPGAMR AVGRISIGGM DMSEDDKTLY
FINLKDRKIY GVFINSTAVA PTSATAVKSW AIPDPGCSNG DFRPWALKVY HGKIYIGVVC
SAETSQQKSD LSATIYRFDP NAATPVFETV LAFPLDFRRG PADLTTDPNQ PDYDCTKYDH
WLPWTDAWPT PCGLGDSRRF VMSPQPILSD LEFDDDGSML IGFMDRFGNM SGVANHNPAG
NGLYDGFTGG DLLRAYNNNG TLELEKNGKS GGLAGSGVGN GEGPVDENNV GGEFFGNDYW
LFHNKVGHAE VSNGSLTFIP GYTEVITSAF DPITDIYQSG GFKVFGAKTG FVNRNYVLYT
LEETPGVFGK AGGLGDVKAL CDPASVEIGN RFWFDDNRDG IQDAYEPGID GVVLTLHDIE
NGGTTVGTQT THDGGQFYFN NATVPGGLRY MHKYEIRMDT AQLRSLDITL DGVKPLAASG
GRLAARAVGA RQGAASRQRY YALSPANQAN YADADLRDSD ALLVGQSAVI SVTTMDAGQN
DFTNDLSIYS CPELTTEKDT VSLCPGVKLD SIAAVGNYLS RVDSVRFVLF TSPQSGTAMY
ANTGVVLGTV KPGPNINRAV LYNPLITTDN NTGNKRNQYI YAIIYPTPAN VSCRQSDKTV
IKIAPSLRAV ATGGTLTCSV KSLTLKGQAQ YSDGTPAPSA VYRWRGPSSF SSVVQNPTVS
VAGSYTLTVG DPACSASFTT TITSVTSDTM TPNLNTSVVG KSCPSCAARI SATAPGASLR
WSGPGSFTAV GSEVDVVVDG LYSVTATGSN GCWSTAQVLV SPSYCPVVEL SNSSLSLCSG
MKLDSISVQT DHLQNGESIR FVVFSTPQSG TAMYGSGGVV LGTVLPVGKR AVLVQPQLNT
FNTGSVVLKQ YVYALIYPTP GPAECRQSDE LVVSVSPSVK AVATGGTLTC SVKSLTLKGQ
AQYGDGTPAP SAVYRWRGPS SFSSVVQNPT VSVAGSYTLT VGDPACPASF TTATISVTSD
TIAPVLQTSV SAKLCVSCAA TISAQSLGAT LSWTGPNGFL ATGSSQTVTA DGLYTITATG
VNGCTSQSTV NITPYACPPV VCLPFGIRRI R
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