| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4008 |
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| Symbol | |
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| ID | 8727766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4819513 |
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| End bp | 4820535 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003388797 |
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| Protein GI | 284038867 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000985107 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000124933 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGTC ATCAGGTCAC CATTATTGAC ATTGCCCGTC AATTGAACCT GTCCAAGTCA
ACTGTTTCGC GAGCCCTGAC CGGTCATGCA TCAGTGAAAG AGGATACCCG GCAGGCGGTG
CTAACGCTCG CCAAAGCGCT GGACTACCAG CGAAATATGC TGGCTATCAA CCTGTCGTCG
AGCCAGAGCC GAACAATTGG CATTATTGTA CCGGAGTTCG TGACGTCATT TTTCCCGGTT
GTCATTATGG GAGCGCAGGA GATAGCCGAT CAGGCCGGAT ACACTGTCCT GATCTGCCAG
TCGAATGAGA GTTACGAAAC AGAAGTAGCC AATGCACGGA CAATGATCGC GAATCGGGTG
GATGGCGTAC TGGTGTCGCT GACGCGTGAA ACAAGGAATT TCGACCACCT CGCCGTATTT
CAGCGGAAAG CGGTTCCCAT GGTTTTTTTC AACCGGATCT GTTATGATAT CGACGTACCC
AAAGTTGTTG TCGATGATTA TGAAGGGGCT TTTAAAGCAA CGGAACACCT GATCCAGACG
GGCAAACGGC GTATTGCTCA TCTGGCCGGT CCGATGTCGC TTTACATCAG CCGAAAAAGA
CTGGAGGGGT ATAAAGATGC ATTACGGAAA CATAACCTTC CGATTGACGA CGACCTGATT
ATCAGCTACG ATCTAAACCT GGAGCGGGCC AAGATCTACG TAAACTACCT GCTCGATCTA
CCCGAACCGC CAGACGCCCT GTTTGCGGTC AATGATCCAA CCGCGCTCGA AGCCCTGAAA
ATCATCAAAG CCCGGGGGCT TTCAATACCC GATCAGATAG CCGTAGTTGG GTTCAGTAAC
GATTATGGTT CATCGTTGAT CGAACCAGGG CTAACAACCA TTGCCCAGCC CACACGGGAT
ATTGGTCGGA TAGCCGCTCA GTTGCTGCTG GAACAAATTA ACTCAGAAAC AACTACCTGG
AAACCGGTAA CCCGAGTCCT AAAAACGGAA CTCATTGTAC GGGGCTCCAG CGTAAAACCC
TGA
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| Protein sequence | MKRHQVTIID IARQLNLSKS TVSRALTGHA SVKEDTRQAV LTLAKALDYQ RNMLAINLSS
SQSRTIGIIV PEFVTSFFPV VIMGAQEIAD QAGYTVLICQ SNESYETEVA NARTMIANRV
DGVLVSLTRE TRNFDHLAVF QRKAVPMVFF NRICYDIDVP KVVVDDYEGA FKATEHLIQT
GKRRIAHLAG PMSLYISRKR LEGYKDALRK HNLPIDDDLI ISYDLNLERA KIYVNYLLDL
PEPPDALFAV NDPTALEALK IIKARGLSIP DQIAVVGFSN DYGSSLIEPG LTTIAQPTRD
IGRIAAQLLL EQINSETTTW KPVTRVLKTE LIVRGSSVKP
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