| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3996 |
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| Symbol | |
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| ID | 8727754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4807498 |
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| End bp | 4808850 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | secretion protein HlyD |
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| Protein accession | YP_003388785 |
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| Protein GI | 284038855 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.497269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000255952 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTAACA TATCCAATCA GCGGGTTGAC GAACAGCTGT TTAACCATTA CCCGCTCAAA
ACCCTGCACA CCCTCCCCCA GCCGGATGCC GGTCGGCGGC TGGGTCGCTG GATGCTGATC
ATCCTGTTCA TCAGTCTGGC GGTGTTGTTC TTACCCTGGC AGCAAAACAT CAACGGCGAG
GGCAGTGTAA CCGCACTCAC TCCTCAGGAC AGGCCCCAAA CGGTACAGAA CGCCATCGCC
GGCCGAATTG AACGCTGGAA GATTCAGGAA GGACAATCGG TTCGGAAAGG TGACACTCTG
CTGGTTATTT CCGAGATTAA AGATGATTAC TTCGACCCTA ACCTGCCTCT GCGTCTGGAC
GAACAGCTGG ATGCCAAACG CGGTAGCCTG ACAGCGACAG GTGCTAAAAT TGCCGCTCTG
GATGAGCAGC TGTCGGCTTT GCAAACAGGC TTGCAGGTGA AGCTGGCTTC GGCCCGTAAC
AAAGTGCGGC AGAGCCAGTT CAAAGTCATC AGCGACAGCA CAGACCTGAT TGCCGTTCAG
AAAAACTATC AGATTGCCCT CGACCGGCTC GACCGCTTCG AGAAAGGCTA CCGGAATGGT
CTTTTTTCGC TGACGGACCT GGAAACCCGT CGGCTGAAAG TTCAGGAAGA TAACGCTAAA
GTGATTGCCC AGGAAAACAA ACTGAACGTA TCCCGACAGG AGCTTATTAA CTCCCGGCTC
GACCTGAACA CTATTCAGGC CGATTATCAG GAGAAAATAG CCAAAACGAT GTCAGATCGA
AGTTCGGCGG TTTCCTACCG GGCTGAAGCA GAAGGTGAAA TCTCTAAAAT TCAGAATAAG
ATCAGCAGTG TCGATGTACG GCGGGGTCTC TATGTCGTTC GTGCCCCGCA GGATGGCTTT
GTCGTACGGT CTCTGAAAGC GGGTATCGGT GAGATGATTA AGGAAGGTGA GTCGATTGCT
ACATTACAAC CTGCTCACCC CCTGGTGGCT ATCGAACTGT ACGTCCGCCC CATGGATGTG
CCACTTATTC AGCGGGGCCG CACGGTACGA CTTCAGTTCG ATGGGTGGCC CGCCATTCAG
TTTTCGGGCT GGCCCTCGGT AGCTGTGGGT ACGTTTGGGG GCGAGGTGGC CGTTATCGAT
GCGGTCAACA GCGTAAACGG CAAATATCGG CTTTTGGTGA AACCAAAAGT ACAGAAGGGC
GACCAGCCCT GGCCGCAACA ACTCCGGGTA GGCTCGGGCG TTTATGGCTG GGTAATGCTC
GACAATGTAC CGATCTGGTA TGAATTATGG CGGCAGTTGA ACGGCTTCCC GCCCAGTTTG
AAAGAGGAGC CCAAAGAAGA GAGCAAAAAA TGA
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| Protein sequence | MLNISNQRVD EQLFNHYPLK TLHTLPQPDA GRRLGRWMLI ILFISLAVLF LPWQQNINGE
GSVTALTPQD RPQTVQNAIA GRIERWKIQE GQSVRKGDTL LVISEIKDDY FDPNLPLRLD
EQLDAKRGSL TATGAKIAAL DEQLSALQTG LQVKLASARN KVRQSQFKVI SDSTDLIAVQ
KNYQIALDRL DRFEKGYRNG LFSLTDLETR RLKVQEDNAK VIAQENKLNV SRQELINSRL
DLNTIQADYQ EKIAKTMSDR SSAVSYRAEA EGEISKIQNK ISSVDVRRGL YVVRAPQDGF
VVRSLKAGIG EMIKEGESIA TLQPAHPLVA IELYVRPMDV PLIQRGRTVR LQFDGWPAIQ
FSGWPSVAVG TFGGEVAVID AVNSVNGKYR LLVKPKVQKG DQPWPQQLRV GSGVYGWVML
DNVPIWYELW RQLNGFPPSL KEEPKEESKK
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