Gene Slin_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3989 
Symbol 
ID8727747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4796309 
End bp4796629 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content54% 
IMG OID 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003388778 
Protein GI284038848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0189718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCG GTAATCTGTT TGCTTCTATT CCCGGCTCAT TACCCGAGGA ATTGTTCGAC 
GAAATCCTGA CGGGCAATGG ATTTAAGCTC GAACGCATCG TCTCGAAAGG GCATGCTTCA
CCCGAAGGGT TTTGGTACGA CCAGGACCAG CATGAATGGG TGCTGCTGGT AAAGGGCGCG
GCCAGGCTGC AAATTGACGG CGTCGACGAA CCCGTCGAAC TGCTGCCGGG GATGCACATC
AACATCCCCG CGCATCGGAA GCATCGGGTG GCCTGGACGA AAGAAGACGA AGAGACGATC
TGGCTGGCTA TTTTTTACTA A
 
Protein sequence
MTIGNLFASI PGSLPEELFD EILTGNGFKL ERIVSKGHAS PEGFWYDQDQ HEWVLLVKGA 
ARLQIDGVDE PVELLPGMHI NIPAHRKHRV AWTKEDEETI WLAIFY