Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3932 |
Symbol | |
ID | 8727690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4715315 |
End bp | 4716052 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | protein of unknown function DUF224 cysteine-rich region domain protein |
Protein accession | YP_003388721 |
Protein GI | 284038791 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.38362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTG GCCTGTTTAT CCCTTGTTAC ATTGACCAGT TTTATCCCAA CGTAGCCATT GCTACGCTGA AGTTGTTGGA AAAAGTAGGC TGCGACGTTT CGTATCCGCT CCAGCAAACC TGTTGCGGAC AGCCGATGGC CAACTCCGGT TTCGAACATC TAACGGGCGG CTGTAACGAG AATTTCGTCC GCAACTTTGC CGACTTCGAT TACGTCGTTT CCCCGTCGGG GAGTTGCACC CTGCACATAA AACACCACCT TCACTCGACC AATGAGGAGG CCGCAACCAA CATCCGCTCC CGCATTTACG AACTGACGGA GTTCCTGACG GACGTGCTGA AGGTAACCAG TTTGGATGCC ACTTTTCCGT ATAAAGTTGG GTTACACCAG AGCTGCCACG GCCAGCGTGG GCTGCATCTG GCCCAGATGT CGGAACTGGT GGTTTCGCCA CCTTTTTCGA AACCGGTGCA ACTGCTCAAC CTGGTCAATG GCATTGAGTT GATCCAGCTC GACCGGCGCG ATGAGTGCTG CGGCTTTGGC GGCACGTTCT GCGTAACGGA AGAAGCCGTT TCGGTAAAGA TGGGGAAAGA TCGGGTGGCG GATCACCTGC GCCACGGCGT TAATTACATC ACCGGCGTCG ATGTGTCCTG CCTGATGCAC ATGGAAGGCA TTCTGAAACG GGCAAACTCC GCTGTGAAAG TCAAACACAT TGCTGAAATT TTAACGGCTA CGCTTTAA
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Protein sequence | MKVGLFIPCY IDQFYPNVAI ATLKLLEKVG CDVSYPLQQT CCGQPMANSG FEHLTGGCNE NFVRNFADFD YVVSPSGSCT LHIKHHLHST NEEAATNIRS RIYELTEFLT DVLKVTSLDA TFPYKVGLHQ SCHGQRGLHL AQMSELVVSP PFSKPVQLLN LVNGIELIQL DRRDECCGFG GTFCVTEEAV SVKMGKDRVA DHLRHGVNYI TGVDVSCLMH MEGILKRANS AVKVKHIAEI LTATL
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