Gene Slin_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3914 
Symbol 
ID8727672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4693333 
End bp4694154 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003388703 
Protein GI284038773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.732284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.454673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA TCACAGTAAG TGACGGTACC GAGATTTACT ACAAGGATTG GGGAACAGGT 
CAGCCGCTGG TTTTTCATCA CGGCTGGCCA CTTTCCAGCG ACGACTGGGA CGCCCAACTG
ATGTTTTTCG TAGCACAGGG ATTTCGCGTG ATTGCGCACG ACCGAAGAGG GCATGGCCGA
TCATCCCAAA CCTCCGAGGG ACATAACATG GATACGTATG TAGCCGACGT AGCTGAACTT
ACCCAGTTCC TCGACTTGAA AGATGCCATC CACATTGGCC ACTCGACCGG GGGTGGCGAA
GTGATTCGGT ATGTAGCGAA GCATGGACAG GGCCGGGTAG CCAAAGCGGT ACTGATCAGT
GCCGTAACGC CACTTATGGT TCAGACCGAA GCCAACCCGG ACGGTGTTCC GGTATCGGTA
TTCGATGAAA TACGCGAAGG TACGGCCAAA CACCGTCCCC AGTATTTCAA GGATTTCACC
ACTGCTTTTT ACGGCTACAA CCGGGAAGGC GCAAACGTAT CGCAGGGCAT TCAGGATAAC
TGGTGGCGGC AGGGCATGAT GGGGAGCATC AAAGCCCACC ACGACGGCAT CAAGGCCTTT
TCGGAAACCG ACTTTACGGA GGATCTTAAA CGTGTGGATG TACCCGTACT GGTGCTGCAC
GGGGAAGATG ACCAGATCGT CCCTTTCGCT ATTTCCGCCG TAAAAGCAAT CAAGCTATTA
AAACACGGGA AACTGATTTC ATACCCGGGC TTTCCGCATG GCATGCCCAC CACCGAAGCA
GACACGATTA ACGCCGACCT GCTGGCCTTT ATTAACTCGT AA
 
Protein sequence
MSKITVSDGT EIYYKDWGTG QPLVFHHGWP LSSDDWDAQL MFFVAQGFRV IAHDRRGHGR 
SSQTSEGHNM DTYVADVAEL TQFLDLKDAI HIGHSTGGGE VIRYVAKHGQ GRVAKAVLIS
AVTPLMVQTE ANPDGVPVSV FDEIREGTAK HRPQYFKDFT TAFYGYNREG ANVSQGIQDN
WWRQGMMGSI KAHHDGIKAF SETDFTEDLK RVDVPVLVLH GEDDQIVPFA ISAVKAIKLL
KHGKLISYPG FPHGMPTTEA DTINADLLAF INS