Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3897 |
Symbol | |
ID | 8727655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4677150 |
End bp | 4678091 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003388686 |
Protein GI | 284038756 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.213475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGG TAGGCATCCT TGGCGGAGCT GGCTTCATTG GCAGCTACGT CACCCAAAAA TTTCTGAATG AGGGCTACAT CGTGAAGGTA TCCACTACTG ACCTTGCCAA GCCCGAAAAA TACCAGCATC TGCATCAGCT TTCGCTCGCT GAAAACCTGA CCATCAGGGA AGTGGACGTA ACCAACGAAG CGGCCCTGGG CGAGTTTCTA CGGGATTGCA ACATTGTGGT TCATAGCGGC ACTCCCTTTC AATTAGCCGC CGAGAATCCG CAGAAAGAGG TGTTCGAGCC GACCGTCCGC GGAACCGAGA ACTTCCTGAA GGTTGTCAGC CAAACGCCTT CGGTCCAGAA AGTGGTGTTT GTGGCTTCAG TAGGTGCGCT CAACACCGCT TACCCGATGC CTGTCCCCTA CTACCCTGTC GACCACTTGT ATACCGAAGC TGACGAGCCG TACCTGGACC CCGAAGCCAT TCCCTACGCG CGGGCCAAGT ACTACGCCGA CCAGGCCGTC CGAACATTCG TGGCCACGTA TCCCCAACCC GGTTTCGAGA TCGTGAGCGT GTCGCCCACG GGCGTGATGG GTAAACCGCT GTCGGCCCGT GAGGATTCGA CGTCGGTGGG CCTGCAATAC CTTATCAAGC ATAAAATTGC GCCCAATCCG TTCGTGCAGA TGATGTTTGA CCACGACGTG GAGATGGCCA TTGTGTCGGT TTCCGACGTG GCCGAGGGGA TTTTTCGGGC CGCAACCACC GCCGGTCTGC ATGGCAGGAA CTACCTGATC AACAGCGAAA GCTATAAAAT ATCGGACATG ACGCTCATGC TGAACGGCAG ATCCCCGATC AACGCTGCCC GAAACGTGTA TAGCTATGCG TTGGCTGCTC AGGAGCTGGG AATGCAGTTC CAACCCGCCT ACGTACCGCT CAGCGAGTGG GCCGACGTTT GA
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Protein sequence | MQTVGILGGA GFIGSYVTQK FLNEGYIVKV STTDLAKPEK YQHLHQLSLA ENLTIREVDV TNEAALGEFL RDCNIVVHSG TPFQLAAENP QKEVFEPTVR GTENFLKVVS QTPSVQKVVF VASVGALNTA YPMPVPYYPV DHLYTEADEP YLDPEAIPYA RAKYYADQAV RTFVATYPQP GFEIVSVSPT GVMGKPLSAR EDSTSVGLQY LIKHKIAPNP FVQMMFDHDV EMAIVSVSDV AEGIFRAATT AGLHGRNYLI NSESYKISDM TLMLNGRSPI NAARNVYSYA LAAQELGMQF QPAYVPLSEW ADV
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