| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3859 |
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| Symbol | |
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| ID | 8727617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4630846 |
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| End bp | 4632231 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003388648 |
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| Protein GI | 284038718 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0201275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAACC GAACACTAAA TGCTGTCCAG ACAATACTGC GAAAAAACGC AGCCGTGTCT
TTACTAGGCA ACGGCACGGC TGCCATTATC TCGCTCACCA CAACGGGTCT GCTGGCGCGT
TGGATGCCTC GTGAAGCATT TGGTACCTGG GTACTCTTTT TGGTTACCTA TACATTGTTT
GATACGCTTC GGTCCGGCTT ACTGCTCAAC GGAATGATTC AGTACACGGC CGACCTGCGC
GTGGAAGCCC GGACGTTTGA AGCAAGCCTG AAACGCTGGG AAGGGGCTGT CTGGCAGCTT
GGTTTGCTCA TGACAATGGT TGTGGGGCCC TTCCTGATTG GCTTGACCTA CTATTTTCCC
ATGATCAGCG AATGGGTCGG CAACTCCGAA ACAGCCGTTT GGTTCTGGAT CATCAGCCTG
GTATCGTTAC CTGCCAACAT TGCCACCTGG TTTCTGCACG CCCGGTCGCA GTTCAAACCT
CTGCAATGGA TACGGGTGCT TACCCAACTG GTGTTTCTAT TGCTTATCAT TGGGTGTTAT
CAGTTCCAGC TGTTTCCGGG CAATAGCCTG TACGGTTTGT TTGCCGTTGC CAACGGGGCT
ATCAGCCTTT GGTCCTTATT TATTGGATGG AGCCGGTGGC GCTCCATTCC GGCGGGCAGA
ACTGCCCAAC GGAACGCACT CTTTCATTTT GGCAAGTATA CCATTGGCAC GCTCGTCGGC
TCCAATTTAC AACGCAGTGC AGACACCCTG CTGCTGGGGG CCATACTGGG TCCGGAAGCG
GTAGCGCTGT ACGCCATTCC ACAACGACTT ACTCAACTCC TCGATATGCC GGTACGCAGT
GTCGTCGTAA CAGCCATGCC ACGTCTGGTG AAACTACAGC AGCAGGGAAA GTCTGGCGAA
CTAGCCGCTT ATTTTCAGCA AAGTGCGGGC CTGCTCTGGC TGGTTATGCT GCCGTTATCA
ATCGCCGGAT TTGTACTTGC CGAACCCCTG GTTACGCTGT TGGGTGGTGG ACACTACCGC
GATGGGGCCA CGTTAATGCG CTGTTTTATG CTGTATGGTG CCCTGCTTCC TCTCGACCGG
TATTCCGGCG TTGGCCTCGA TGCCATCGGC AAACCGCAGT TCAACCTGGT TAAGGTACTG
TTCATGCTCT GCATACAGGT GGGAGGTGCT CTGGTAGCTC TGCTCGTATT CAGATCGACC
ACGGCGCTGG CCGGTGTTTC AATTGTCACG TTTGCCATGG GTATGCTGCT GGGCTTCCGC
CTGCTGAAGC GCCATGTTCC TATATCATTA ACTGGTTGTA TACAAACTGG GTGGACCGAG
CTGGTCGGCC TCATTACCCG ATTTCGTCAT GAATGGATAC GTTCAACAGT TAAAAATTTC
CGTTGA
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| Protein sequence | MINRTLNAVQ TILRKNAAVS LLGNGTAAII SLTTTGLLAR WMPREAFGTW VLFLVTYTLF
DTLRSGLLLN GMIQYTADLR VEARTFEASL KRWEGAVWQL GLLMTMVVGP FLIGLTYYFP
MISEWVGNSE TAVWFWIISL VSLPANIATW FLHARSQFKP LQWIRVLTQL VFLLLIIGCY
QFQLFPGNSL YGLFAVANGA ISLWSLFIGW SRWRSIPAGR TAQRNALFHF GKYTIGTLVG
SNLQRSADTL LLGAILGPEA VALYAIPQRL TQLLDMPVRS VVVTAMPRLV KLQQQGKSGE
LAAYFQQSAG LLWLVMLPLS IAGFVLAEPL VTLLGGGHYR DGATLMRCFM LYGALLPLDR
YSGVGLDAIG KPQFNLVKVL FMLCIQVGGA LVALLVFRST TALAGVSIVT FAMGMLLGFR
LLKRHVPISL TGCIQTGWTE LVGLITRFRH EWIRSTVKNF R
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