Gene Slin_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3812 
Symbol 
ID8727570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4581743 
End bp4582150 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content41% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388604 
Protein GI284038674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000285676 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.683952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATC TGAAGCACTT TCTTATTGAT CTTCAGCAGG GAGCTTACTT GGATGCTGCT 
GTAGAGATAC CACCTAAATT AGCAGAAGAA ACTGGTTTCA AGCGATTCTT GGCCGCACTG
TACTTGTACT CCATGGCTAG CCTCATTTTG TCGGGAGGGG TGCTAGCGAA GCTATTAGGC
CCCTTGCATC TCGATTTTTT AAAAGCTTCC TTGCTCACAG GAGTTATACC TTATCTTTTC
TACCGACAAT TTTTGGGACC TTTAATCATA AAAAGATTTG ATTTTGTACT AGCTGATGCA
GAAAAAGCGA AGTGCGTAAA GCTTTACCGC TACGTTTTTG CTGGCGCTTT TGGCGTTTTT
GCCGTTGCTC TCATTATTGT ATTTTGTATA TCTACTAAAT CTTTCTAA
 
Protein sequence
MVNLKHFLID LQQGAYLDAA VEIPPKLAEE TGFKRFLAAL YLYSMASLIL SGGVLAKLLG 
PLHLDFLKAS LLTGVIPYLF YRQFLGPLII KRFDFVLADA EKAKCVKLYR YVFAGAFGVF
AVALIIVFCI STKSF