Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3812 |
Symbol | |
ID | 8727570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4581743 |
End bp | 4582150 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388604 |
Protein GI | 284038674 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000285676 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.683952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCAATC TGAAGCACTT TCTTATTGAT CTTCAGCAGG GAGCTTACTT GGATGCTGCT GTAGAGATAC CACCTAAATT AGCAGAAGAA ACTGGTTTCA AGCGATTCTT GGCCGCACTG TACTTGTACT CCATGGCTAG CCTCATTTTG TCGGGAGGGG TGCTAGCGAA GCTATTAGGC CCCTTGCATC TCGATTTTTT AAAAGCTTCC TTGCTCACAG GAGTTATACC TTATCTTTTC TACCGACAAT TTTTGGGACC TTTAATCATA AAAAGATTTG ATTTTGTACT AGCTGATGCA GAAAAAGCGA AGTGCGTAAA GCTTTACCGC TACGTTTTTG CTGGCGCTTT TGGCGTTTTT GCCGTTGCTC TCATTATTGT ATTTTGTATA TCTACTAAAT CTTTCTAA
|
Protein sequence | MVNLKHFLID LQQGAYLDAA VEIPPKLAEE TGFKRFLAAL YLYSMASLIL SGGVLAKLLG PLHLDFLKAS LLTGVIPYLF YRQFLGPLII KRFDFVLADA EKAKCVKLYR YVFAGAFGVF AVALIIVFCI STKSF
|
| |