Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3807 |
Symbol | |
ID | 8727565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4576934 |
End bp | 4577926 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | Alpha/beta hydrolase fold-3 domain protein |
Protein accession | YP_003388599 |
Protein GI | 284038669 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.136684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.307308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCA CGGCACAAGA GCGCCCGTTT AAAGGCGAGC AGGACCCACA GATTTTTTCG GAGGTTAGAA CATTTTTGCA GGCATTGAAT GCAGGCGATG GGAAGCCCGT GGAAGCCTTA AGCCCCGCCG ATGCCCGGCA GGTATTGACC GGTGCTCAGC AATCGGTCGA GGTTGATTAC TCGGGTATTA CCGAGACCGA AAAAACGATC TCACAGAACG GCTACCAGGT AAACATTCAC ATCGTAAAGC CCGAACAGAG TCAGGATGGT GCACCGGTGT TCCTCTTCAT CCACGGGGGA GGCTGGGTGC TGGGCGACTA CCCCACCCAC CGACGAATCG TGCGTGATCT GGTGGTCAAC AGCGGGGCCG TAGCCGTCTT CCCCGATTAT ACGCCCTCGC CCGAAGCGCA GTACCCAACG GCTATCAACG AGATTTACGC CACACTGCAA TGGGTAGCCG AACAGGGCGC TGAAATCGGG GTGGATGGCA GCAACATGGC CGTTGTCGGC AATAGTGTTG GTGGTAATAT GTCAACGGTT ATGGCCTTGA TGGCTAAACA CAACAACGGT CCCAAACTCA AATTACAGGT GCTGCTGTGG CCCGTTACCA ATGCCGATTT TGATACCGAC TCGTACAACC TGTTTGCGAA TGGTCGGTTC CTCACCAAAA ACATGATGAA GTGGTTTTGG GATAACTACC TGCCCGACAC CACTAAGCGC AACGAGATCT ATGCATCACC CTTGCAGGCT ACTGCCGACG AGCTGAGGGA CTTGCCACCA GCGCTGGTAC AAACTGCCGA AAACGATGTA TTGCGGGATG AGGGCGAAGC CTATGCCCGT AAGCTGAACG AAGCGGGTGT GCCGGTAACC CACACCCGGT ATGGCGGTCT GATTCACGAC TACGGCCTGC TGAATCCCAT TGCCACCGTG CCAGCAGTAC AAACAGCCCT GTTGCAGGCA GCTGCCGTGA TCAAAGCGGC TTTAAAGGCC TAA
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Protein sequence | MSSTAQERPF KGEQDPQIFS EVRTFLQALN AGDGKPVEAL SPADARQVLT GAQQSVEVDY SGITETEKTI SQNGYQVNIH IVKPEQSQDG APVFLFIHGG GWVLGDYPTH RRIVRDLVVN SGAVAVFPDY TPSPEAQYPT AINEIYATLQ WVAEQGAEIG VDGSNMAVVG NSVGGNMSTV MALMAKHNNG PKLKLQVLLW PVTNADFDTD SYNLFANGRF LTKNMMKWFW DNYLPDTTKR NEIYASPLQA TADELRDLPP ALVQTAENDV LRDEGEAYAR KLNEAGVPVT HTRYGGLIHD YGLLNPIATV PAVQTALLQA AAVIKAALKA
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