Gene Slin_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3747 
Symbol 
ID8727505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4511916 
End bp4512677 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content44% 
IMG OID 
Producttransposase IS4 family protein 
Protein accessionYP_003388542 
Protein GI284038612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC AGTTTTCGAA GCTGACCGAC CCTCAATGGG CGGCAATTTC GCCTTTTTTC 
AATCTAAAAC GCAAGCGAAA ACACGATTTA CGTCAAGTGA TAAACATCAT TTTATGGCTC
CTACGAACAG GCTGTCAATG GCGTAATCTA CCCGAGGAAT GGCCAAATTG GCAAGCGATC
TACTATTACT TTGAGCAATG GAAACAAGAT GGTACGTTTG AACGGATCAA TTTAGTTTTA
AATCAGTTGG ATCGTAAAAG GGTTGGTAAA GAGTCCTATC CTTCCGCATT ATGTATTGAT
GCACAGAGTG TTAAACTAAG TCCAATGATT TGTGAATACA GGGGTCTGGA TGCCAACAAA
CGAGTCAATG GCCGTAAAAG ACAATTTGTC GTCGATACGC AAGGTCGACT CTGGGTAGCG
GATGTTCATG CGGCAAATCA AGCCGAAGGC CCCGCAGCTA TCGTCCTAAT TGGCGATGTT
CTTTGGCGTG CAGGCGAACG CTTAAAAAAA GTGTATGGTG ATCAGTCCTA CAACGGTGTT
TTTGCCAAGG CATTAGCTGA TTGGGACATC ACTTTTGAAA AAGCATCGCG GGCCGAATCG
ACCCGAGGAT TTGTCCCTGT TGCTAAACGC TGGGTAGTCG AACGTACGAT TGCGTGGACA
AATTTCTTCC GGCGCATTGT CAAAGATTAC GAATATACCC TATCATCTTC GGCCAATTGG
CTTTATTTAG CTAACATTCA ACTAATGCTC CAGCGAATTT GA
 
Protein sequence
MTKQFSKLTD PQWAAISPFF NLKRKRKHDL RQVINIILWL LRTGCQWRNL PEEWPNWQAI 
YYYFEQWKQD GTFERINLVL NQLDRKRVGK ESYPSALCID AQSVKLSPMI CEYRGLDANK
RVNGRKRQFV VDTQGRLWVA DVHAANQAEG PAAIVLIGDV LWRAGERLKK VYGDQSYNGV
FAKALADWDI TFEKASRAES TRGFVPVAKR WVVERTIAWT NFFRRIVKDY EYTLSSSANW
LYLANIQLML QRI