Gene Slin_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3714 
Symbol 
ID8727467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4476060 
End bp4477376 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content46% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003388515 
Protein GI284038585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.248399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000324406 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCTTT CTGCTATATC TTCTCAGTTC CTTAATCGTC ACAGTGAAAT CGTTGAGTTG 
ATAATCCAAA AAAACTGGCG ACTGACGGCA CTAGGCCCCC TGGAGGAATG GCCGCAAAGT
TTACAAACAA CGCTCAGTAT CTGTCTTCAT TCCCGGTTTC CAATTCTGTT TTGGTGGGGA
CCCGAGTTCA AAATGATCTA CAATGATGCT TATGCGCCTC TACTGGGCAA TAAACATCCA
GCGGCATTTG GTAGCCGGGG TGATCAGGTC TGGGGTGAGG TTTGGGATAG TATTGGACCC
AGGCTGACTC AGGTGATGAA GAGTGGCGAA TCAACCTGGT CAGAAAATGA ACGATTTACC
ATCAATAGAC ACGGCTTCCT GGAGGAGGGC TACTTTACAT TTTCCTACAG CCCGATCTAC
GTCGAATCTG GTAAAATTGG GGGCGTTTTT ACCGTAGTAA CCGAAACAAC CCAAGTCATT
CTCGCCCAAC AGCAATTGCG CCTTCAACAC GATCAGATTG AGCAGATAAA CGGTGAATTA
GAGTCGAAGA TCCAACAGCG TACCCAGGGA TTGCACGATT CATTGGCTGC TTTGGAGAAG
ACCAAACTTG AGCTAGCCCA AGCCCTGCTC CTTGAGCAGG CTCTTAGTAA GCTGAAATCG
CAATTTGTGG CCATGGCCTC TCACGAATTT CGTACGCCCC TGACCGTGAT AAAGACGTCG
GTGGATTTAG TAGAAAAATA TACCGAGCAC CTGAAGGATC TTCCTATCCA AAAACATTTC
GACCGAATAG GCATTGCCAT TAATCATTTA ATAACGACGC TGGAAGATTT TTTACTGATG
GGACAACTGG ATGAGGGCCA AACGAAAGTG AAACCATATC CGTTTAATCT GGTGGATGCG
GTCAATCAAC TTATCTTAGA TATTGAAGTT CTGGTCAAAC CCAATCAAAG GGTCGAAAGT
CAAATCGAGT GTTTTACTTC CATCTATATG GATGCCACAT TGCTACGCAA AATACTGCTA
AACCTATTGA TAAATGCTAT AAAATATTCA GGTAGTGATT CGACTATCCG AATCCAAGGT
GCGTGTGCTG ATGGCTTATT GACGCTTTCC GTTATTGATC AAGGCATCGG CATAGCCGAA
GAGGAGCAGC CCCATATTTT TGAGCGATTC TTTCGAGCGC CCAACGCCAC TACCATAGCA
GGAACAGGTT TAGGTTTATA TATTGTGCGT CATTATGTAG GCTTGCTGAA TGGTCAGGTT
AGCTTGAGCA GTGAGTTGAA CAAAGGGACT ACTGTCACGC TAACGTTTCC GTGTTAG
 
Protein sequence
MALSAISSQF LNRHSEIVEL IIQKNWRLTA LGPLEEWPQS LQTTLSICLH SRFPILFWWG 
PEFKMIYNDA YAPLLGNKHP AAFGSRGDQV WGEVWDSIGP RLTQVMKSGE STWSENERFT
INRHGFLEEG YFTFSYSPIY VESGKIGGVF TVVTETTQVI LAQQQLRLQH DQIEQINGEL
ESKIQQRTQG LHDSLAALEK TKLELAQALL LEQALSKLKS QFVAMASHEF RTPLTVIKTS
VDLVEKYTEH LKDLPIQKHF DRIGIAINHL ITTLEDFLLM GQLDEGQTKV KPYPFNLVDA
VNQLILDIEV LVKPNQRVES QIECFTSIYM DATLLRKILL NLLINAIKYS GSDSTIRIQG
ACADGLLTLS VIDQGIGIAE EEQPHIFERF FRAPNATTIA GTGLGLYIVR HYVGLLNGQV
SLSSELNKGT TVTLTFPC