Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3706 |
Symbol | |
ID | 8727459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4467113 |
End bp | 4468048 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | GSCFA domain protein |
Protein accession | YP_003388507 |
Protein GI | 284038577 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000684078 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000000345812 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTTA AAAAATGGAG GCCTTTGCCT AATGGAATGA ACTATGATGG TGGTATTTTT TTCACTCCTG AATTTGATCA TAGGATTATC ATTGATTCAG ATGATGGCAT CTTTACGATC GGTTCCTGTT TCGCCAGAAA TATAGAAGCC TGTTTAAATC CTTCATTTAA GGTACCCAGC TATATTCTTT CTGATAATAT TCCAGAAGAT ATTAGGATAA TAGAGAACAA CCCGACTCGG AACAGGGTAC TGTGGCACAG ATATAATGTA TTCTCTATTC TCCACAGTAT TGAATGGAGC CTTTGCCCGC CAACCGGTTT CTCTAGGCTA ATGAAAGTTG ATAACACTGG TTTCGTAGAC CCTTATGCAG GTTGCAGGGA TATATTGCAG CAAAAGGATG CAGAACGATT AGTGAATTGG GCAGATGATA CTTTCAAACA GATCAGGGAA TGCCGTGTTA TTATCATAAC ACTAGGATTA TCAGAGGTTT GGGAAGATCG TGAAACAGGA CTTGTTATGA ATTGCTCACC ATTGATGGAA ATGTGGAGAA CATATCCGGA ACGTTTTACA AAACGGGTAG TGAGTTGTTT TGAAACAGTG GAGCAATTAG AAAATATTTA TGCGTTGCTG AAGAGATATT GCCCGGATGA TTTTAAGGTT ATTGTAACCG TTTCCCCAAT ACCACTTGCT AACAGCTTCA GGGATGTGGA TGTAGCAGTA GCCAATACCG CTTCAAAATC TATCCTCAGA GCAGCTGCAG AAGAGTGGAC GAGTCGGCAT CAAAATGTTC ATTACTTTCC TAGCTATGAA ATAATACTAA ACTCCCGTCA AGAAGCTGTA TGGACTGAGG ATTTTCGCCA TCCTAACGTG GAGTCTATTC GGCATGTAAT GAAAGTCTTT TTTAATCACT TTATTGAGAA ACGAACTATT CAGTGA
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Protein sequence | MKFKKWRPLP NGMNYDGGIF FTPEFDHRII IDSDDGIFTI GSCFARNIEA CLNPSFKVPS YILSDNIPED IRIIENNPTR NRVLWHRYNV FSILHSIEWS LCPPTGFSRL MKVDNTGFVD PYAGCRDILQ QKDAERLVNW ADDTFKQIRE CRVIIITLGL SEVWEDRETG LVMNCSPLME MWRTYPERFT KRVVSCFETV EQLENIYALL KRYCPDDFKV IVTVSPIPLA NSFRDVDVAV ANTASKSILR AAAEEWTSRH QNVHYFPSYE IILNSRQEAV WTEDFRHPNV ESIRHVMKVF FNHFIEKRTI Q
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