Gene Slin_3656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3656 
Symbol 
ID8727409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4414094 
End bp4414645 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003388461 
Protein GI284038531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCAAC CGGAAGATCA GGTCTATATC GATAAAGTCA GAAATGGAGA CTCGGCTTCC 
TATGCATTTC TTGTTGATCG GTATAAGCAT ATGGCCTATA CGATTGCGCT GCGCGTAATG
GGGAATGCTG AAGATGCTGA AGACGCTGCA CAGGATGGAT TTGTCAAAGC CTATCAGCAA
ATCCACCAGT TCGAAGGGAA ATCGAAGTTT TCTACCTGGC TCTACACCAT TGTTTATCGG
GTAGCCATTA CGCGATTAGA GCAGCAACGG GTAACCACGG TTCCTATCCA TGAGGAAATG
ACGGATGCAT ATACGTTACA GGATTATACT TCTCAACTGG AGCATCTACA GGTGTCCCAA
CAGCAGAACT ATATCAAAGA AGCCATCGGC CGATTACCGA CAACAGAAGG ATTATTGATT
ACGTTGTATT ACCTTGATGA AAAGTCAATC CGAGAAATTG AAGTGATTAC CGGCTTATCG
GCATCCAACA TCAAGGTAAA ATTATTTCGG GCCAGAAAAG TATTGGAAGA CCAGTTACGT
TTTTTATTGT AA
 
Protein sequence
MKQPEDQVYI DKVRNGDSAS YAFLVDRYKH MAYTIALRVM GNAEDAEDAA QDGFVKAYQQ 
IHQFEGKSKF STWLYTIVYR VAITRLEQQR VTTVPIHEEM TDAYTLQDYT SQLEHLQVSQ
QQNYIKEAIG RLPTTEGLLI TLYYLDEKSI REIEVITGLS ASNIKVKLFR ARKVLEDQLR
FLL