Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3656 |
Symbol | |
ID | 8727409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4414094 |
End bp | 4414645 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003388461 |
Protein GI | 284038531 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGCAAC CGGAAGATCA GGTCTATATC GATAAAGTCA GAAATGGAGA CTCGGCTTCC TATGCATTTC TTGTTGATCG GTATAAGCAT ATGGCCTATA CGATTGCGCT GCGCGTAATG GGGAATGCTG AAGATGCTGA AGACGCTGCA CAGGATGGAT TTGTCAAAGC CTATCAGCAA ATCCACCAGT TCGAAGGGAA ATCGAAGTTT TCTACCTGGC TCTACACCAT TGTTTATCGG GTAGCCATTA CGCGATTAGA GCAGCAACGG GTAACCACGG TTCCTATCCA TGAGGAAATG ACGGATGCAT ATACGTTACA GGATTATACT TCTCAACTGG AGCATCTACA GGTGTCCCAA CAGCAGAACT ATATCAAAGA AGCCATCGGC CGATTACCGA CAACAGAAGG ATTATTGATT ACGTTGTATT ACCTTGATGA AAAGTCAATC CGAGAAATTG AAGTGATTAC CGGCTTATCG GCATCCAACA TCAAGGTAAA ATTATTTCGG GCCAGAAAAG TATTGGAAGA CCAGTTACGT TTTTTATTGT AA
|
Protein sequence | MKQPEDQVYI DKVRNGDSAS YAFLVDRYKH MAYTIALRVM GNAEDAEDAA QDGFVKAYQQ IHQFEGKSKF STWLYTIVYR VAITRLEQQR VTTVPIHEEM TDAYTLQDYT SQLEHLQVSQ QQNYIKEAIG RLPTTEGLLI TLYYLDEKSI REIEVITGLS ASNIKVKLFR ARKVLEDQLR FLL
|
| |