| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3593 |
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| Symbol | |
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| ID | 8727346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4351273 |
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| End bp | 4352748 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003388399 |
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| Protein GI | 284038469 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0532594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG AGCAACTTAT CGGTACAATT GGCAAAAATG GTAAACGCAT TCAACTGCGG
GGTACTGATT TAGCTGCCTT CGACTTCAGC GGTCTCGACC TGACGGGGGC CGACTTAAGT
TTTTCAAACC TCGGAAAGGC GAATTTCCGG GGAGCCATTT TACGACAGGC TAATCTGAGC
TTTGCCAACC TGAGCGGAGC CGATTTTACC GATGCGGATC TTTACGAAGC CAACTTCAAC
TTCAGTTCGC TGGAGAATGT CGATTTGAAC GGAGCCAATG TTGAAGGGGC TTCCTTTAAC
TTTTCCGGTC GAAGTAAGTA TCGGCCCGTC GATACTACCC GAAGCGAACC CATCACACTC
ACGAATATTC TGCAAAAACC TGGCTGGGGT ACACTGATTG GTGCCTTTCT TGGAGCTTTG
CTCGTATATG GGTGTAACGC CATTATCTAT TTCTCCAATT TGATTCTGAA GGCCGAAGAT
CCCCTCATGG TGGGCCTATA TCAGTTTCTT ATTGTACAGA ACATGGTCGA TGGGGCGACT
TGTTTCCTGT TGACATGGGC GCTGTCGGGC TGGCTTAGCC GCCAGTTTAA GCACATATGG
CAGCGCCATA TAGTTGTTAG CCTGGCCGTT ACAGTTAGTT TTTTCATTAT CAATACAGCC
CTGTACTGGA CCATTGGCCA ACCTTACTTA AGGGAATTGG CCGATCGGCC GGGAGGCATT
GAGAAAACGG CGGCCTGGTA TGTTTACGTC CTGGGCGACC TTCTGATTGC CAATATATTC
CTTTACGGGC TTCAGCAGGG ACGGCAGCTG ACCCGAAAAC TATCGGAGCA GGAGTTTCAA
TTGCTCAACA TGGAGAAGCT GAAAACCCGC GCTGAGCTGG ATGCGCTTCA GGCAAAAATC
AATCCGCATT TTCTATATAA CGCCCTGAAC AGCATTGCCA GCCTTGTTCA CGAAAACCCC
GACAAAGCGG AGGAAATGAC GCTGCTTCTC TCCAAGCTTT TCCGGTATTC GACCGGTCGT
AATGGCGAGT TGTTCGCGAG TCTGGCCGAC GAGCTGGAGA TGGTGCGAAC GTATTTGCAG
GTTGAGCAGG TGCGGTTTGG CAATCGGCTT ACCTTCAGCG TAGAAATCAG TAATCCGGCA
CTCAATGAAC TACAACTTCC CCAATTTCTG CTACAGCCCA TTGTCGAAAA CGCCATCAAA
CACGGCATTG CCAAACGCGC CGATCTGGGC CGAATCGACG TCCGTATTTA CGAGAAGTCG
GACGAGTTAC ACCTGTGTGT ACACGACAAT GGCCCGGCTT TCCCCGACGA TATGGGCGGA
GGCTATGGCC TGCGGAGTAT TCAGGACAAG CTTAAGTTAC TCTACGGCGA CGATGCCCGG
GTGGAGTTCC AGAACTGGCC ACTCAAGCAG GTGTTAATCT CTATACTAAT GTCTAAAATT
CGGGCTGTCA ACCTAGTTTC TGCACCCAAC GCTTAA
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| Protein sequence | MTREQLIGTI GKNGKRIQLR GTDLAAFDFS GLDLTGADLS FSNLGKANFR GAILRQANLS
FANLSGADFT DADLYEANFN FSSLENVDLN GANVEGASFN FSGRSKYRPV DTTRSEPITL
TNILQKPGWG TLIGAFLGAL LVYGCNAIIY FSNLILKAED PLMVGLYQFL IVQNMVDGAT
CFLLTWALSG WLSRQFKHIW QRHIVVSLAV TVSFFIINTA LYWTIGQPYL RELADRPGGI
EKTAAWYVYV LGDLLIANIF LYGLQQGRQL TRKLSEQEFQ LLNMEKLKTR AELDALQAKI
NPHFLYNALN SIASLVHENP DKAEEMTLLL SKLFRYSTGR NGELFASLAD ELEMVRTYLQ
VEQVRFGNRL TFSVEISNPA LNELQLPQFL LQPIVENAIK HGIAKRADLG RIDVRIYEKS
DELHLCVHDN GPAFPDDMGG GYGLRSIQDK LKLLYGDDAR VEFQNWPLKQ VLISILMSKI
RAVNLVSAPN A
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