Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3537 |
Symbol | |
ID | 8727290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4270920 |
End bp | 4271804 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_003388343 |
Protein GI | 284038413 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGAAC AACTTAAACC CCATCAGGCT GAGCGCGGAC AGAAGTCGAC CCTGGTAGGT ATAGCCGTCA ATATCGGGCT TGTATTGGTT AAAGGAACCG CCGGGTGGCT GGGAAATTCA TACGCGCTTA TTGCCGATGC TATGGAATCG GCCACTGATA TAGTGACATC CATCTTTGTG TGGATAGGCC TTCGTACGGC CGCCCGCGCT CCCGACCATA ATCACCCGTA CGGACATGGA AAAGCAGAAC CGCTGGCGGC TATTGTGGTG GCCTTCGCCC TGGTAGGGGC CGCCATTCTG ATTGCCGTGC AGAGTATTCA GAATATACGC GTACCGCACG AAACCCCGGC CCCATTTACG CTGGCGGTGC TGGCAGGCGT TGTCATTGTG AAAGAAGTTC TGTTCCGGCG TGTTGCGCAG GTAGGCCATG AAACGGAAAG CAGCGCCGTA AAAGCCGATG CCTGGCACCA CCGCAGCGAT GCCATCACGT CGCTAACGGC CTTCGTCGGC ATCAGCATTG CCCTGATTGG TGGGCCGGGC TACGAAAGTG CCGATGACTG GGCGGCTCTG CTGGCATCGG GCTTTATCGT TTATAACGCC TACCATATTT TCCGCCCGTC GTTCGGCGAA ATTATGGATG AAACCCCCGA AGGCGACTGG CAGCAGGAGT TACAAACGCT GGCCATGACG GTTCCGGAGG TGAAAGGCAT CGATAAATTC AGGGTACGTA AAACAGGCTT CGAATACTTC GTAGACCTGC ATGTCCGGGT ACCCGGTAAC CTGACCGTCA GCCAGGGACA CGACATCGCC CATGCCGTAA AAGCGGCTAT TCTGGATGCC AGACCCGCCG TATACGACGT ATTAGTGCAC ATTGAACCGG TATGA
|
Protein sequence | MEEQLKPHQA ERGQKSTLVG IAVNIGLVLV KGTAGWLGNS YALIADAMES ATDIVTSIFV WIGLRTAARA PDHNHPYGHG KAEPLAAIVV AFALVGAAIL IAVQSIQNIR VPHETPAPFT LAVLAGVVIV KEVLFRRVAQ VGHETESSAV KADAWHHRSD AITSLTAFVG ISIALIGGPG YESADDWAAL LASGFIVYNA YHIFRPSFGE IMDETPEGDW QQELQTLAMT VPEVKGIDKF RVRKTGFEYF VDLHVRVPGN LTVSQGHDIA HAVKAAILDA RPAVYDVLVH IEPV
|
| |