| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3513 |
|---|
| Symbol | |
|---|
| ID | 8727266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4247343 |
|---|
| End bp | 4249283 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003388319 |
|---|
| Protein GI | 284038389 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ACGCCTGTTT CAGCGTCGTA CTATTCCTGT TGGCTATCTC CATCACACAG
GCGCAGCACT GGTACAAAGG TAATCTACAC ACGCACTCGC TCTGGAGCGA CGGTGACGAT
TATCCCGAAA TGATCATGGA CTGGTACAAG GCCAATGGCT ACCAGTTCGT TGGGTTGTCC
GACCATAACA TCATTCAGGA CGTTGATAAA TGGGTAAACG TACCTCGCCA GCCAGATCGA
CGCCGGACGT TCGACCGGTA TCTGCGCACG TTCGGGCCGG ATTGGGTGAC GTACCGAAAA
GGGCAAAATG ACTCGCTGAG TGTCCGGCTC AAACAACTGC ACGAATACCG GAATTATTTT
GAAGAGCCGG GGAAGTTTCT GATCCTGAAA AGTGAAGAGG TATCGACGGG CTATCAGGGT
AAGCCCATAC ACATGAACGT GACGAATGTA AAGAATCTCA TTCGGCCGTT GCCAGGAAAC
AGCGTGGCTG ACGTCATGCA AAACAACATC GACATGGTGG TAGCACAACG ACGGTTGACG
GGTCAGCCCA TGTTTCCGCA CATTAACCAC CCTAATTTTT ACTACGCCAT CAAAGCTGAA
GACCTGATGC AGCTCCGGTA CGAACGCTTC TTTGAAGTCT TCAATGGGCA TCATCTGGTC
AATAATTACG GCGACAGCAC CCACGAAGGC ACGGAGGCCA TGTGGGATAA AATCAACCTG
CATTTTCTGC AACAAGCCCG CCCGCTGATG TATGGGTTGG GTACAGATGA CAGCCACAAT
TACTACTTTT TCGGGCCTGA GTTCAGCAAT TCGGGTCGAA GCTGGGTGAT GGTCGACGCC
CCCGAACTGA CCCCGAAGTC GTTGGTTGAA TCTATGGAAG CCGGTCGTTT TTACGCTACC
TCGGGCGTCA CACTGAAACA GTTACCACAA ATGGGAAACA AGCTGGTCGT GCGGGTTAAA
ACCGAACCCG ACGTGACATA TCGCATTCAG TTTTTTGGCG TCAGAAAAGG TAGTACACAG
GCCGAGCTGC TCCGCGAAGT GATTGATACA GCCGCCATCT ATGCCCTGAC GGATGATGTG
CTCCTGCTTC GGGCGAAGAT CATTTCCAGC AAGCCCAAGT TCAACCCGTT TATGCCGGGG
GATGTTGAAA CCGCCTGGAC ACAGCCTATC GCCCAAGCCA TTGTCCCCCA GCAGCCTGCC
GGGGTAGTGC CGCTTATGAA CGCCCATGCC CATAACGACT ACGAGCAGTC GCGCCCGCTT
TGGGATGCGC TGGATAACGG TTTCACCAGT GTTGAAGCCG ACGTGCATCT GATTGATGAT
AACCTGTATG TAGCGCACGA CCGGCCAACC ATCAAAAATC CGGCGGCTAC CCTCGAAAAC
CTGTACCTCA AACCGCTGGC CGAGCGAATC CGGCAAAATG GCGGCCAGGT GTTTCCAATG
TATAAAGGGC CGTTTTACCT GATGATCGAC GCCAAAACCA ACGCCGACAG CACCTTCAAC
GCGTTAATGA AGGTCTTGCA GCGCTATAAG TCGCTGATTG TTGGTGATAG AAAGGGTAGT
GCCGGGGTGG TCAGCATCGT GTTGTCCGGT AACAGACCCG TGGCCGCAAT GGCAAAGGTG
AAGCAACCGC TGATGGCGAT AGATGGTCGT CCTGCCGATC TTGGCAAGGG GTATAACGCC
GTTCTGATGC CGATAATCAG CGATTCCTAT CCAAACCAGA TTCGGTGGCG GGGAAAGGGC
GACATGCCAG CGGACGAGTT TCAGAAACTG CGCCAACTGG TTGATCAGGT ACATCAGCAA
GGGAAAAAGC TACGGCTCTG GGCGAGTCCC GAAGACCCGC TCGTTTGGGC AAAACTCCGT
GAAGCGGGCG TTGATTTTAT CAGTACGGAT CAACAAGTGC TGGTGCGGGA TTTTTTGCTG
AAGATGAGTG CTGGGAAATG A
|
|---|
| Protein sequence | MKKNACFSVV LFLLAISITQ AQHWYKGNLH THSLWSDGDD YPEMIMDWYK ANGYQFVGLS
DHNIIQDVDK WVNVPRQPDR RRTFDRYLRT FGPDWVTYRK GQNDSLSVRL KQLHEYRNYF
EEPGKFLILK SEEVSTGYQG KPIHMNVTNV KNLIRPLPGN SVADVMQNNI DMVVAQRRLT
GQPMFPHINH PNFYYAIKAE DLMQLRYERF FEVFNGHHLV NNYGDSTHEG TEAMWDKINL
HFLQQARPLM YGLGTDDSHN YYFFGPEFSN SGRSWVMVDA PELTPKSLVE SMEAGRFYAT
SGVTLKQLPQ MGNKLVVRVK TEPDVTYRIQ FFGVRKGSTQ AELLREVIDT AAIYALTDDV
LLLRAKIISS KPKFNPFMPG DVETAWTQPI AQAIVPQQPA GVVPLMNAHA HNDYEQSRPL
WDALDNGFTS VEADVHLIDD NLYVAHDRPT IKNPAATLEN LYLKPLAERI RQNGGQVFPM
YKGPFYLMID AKTNADSTFN ALMKVLQRYK SLIVGDRKGS AGVVSIVLSG NRPVAAMAKV
KQPLMAIDGR PADLGKGYNA VLMPIISDSY PNQIRWRGKG DMPADEFQKL RQLVDQVHQQ
GKKLRLWASP EDPLVWAKLR EAGVDFISTD QQVLVRDFLL KMSAGK
|
|---|
| |