Gene Slin_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3508 
Symbol 
ID8727261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4242597 
End bp4243775 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content51% 
IMG OID 
Productacyltransferase 3 
Protein accessionYP_003388314 
Protein GI284038384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC AAACCAATCC TTCTTACCTC GCCAACTTGA CCCCCCTGCG GGGTATTGCG 
GCTCTGATCG TACTGTTTTT CCACTTCGAT TTGTATTGGA GCGGCCCATT TACGGGTGCA
CTTCTGGACC CTGCCCAATC ACATTTTGCC CAGAAAGGAT ATATCGAAGT GGACTTCTTT
TTCGTACTGA GCGGATTTAT TATGTGCCAC GTATATGGCA CATCGTTCGG TGAGTCTGTA
ACAAAAACAG GTTTCTGGCA ATTTATGAAA GCCCGCTTTG CCCGTATTTA TCCGCTCCAC
TTGTTCACGC TGTTATGGTC TATCCTGCTC TTTGCGGTTA TCATTTCGAC AAATTTTCCC
CTCGACGAAC GTGAAAAGTC GGTATTCAAC CTTTGGGCTA TTCCGGCTCA TCTGTTCATG
TTACAGGGGT TTGGGGTGCC TATTGGCTAT ACCTGGAACG GCCCGGCCTG GACCATCGGC
GTAGAGTGGT GGATGTATGT AGCGTTCCCA TTTATATTCG CTCCTCTCTC GCGCCTGACC
CATTGGGGAA AGCTGGTATT ACTGGTCGTG CTGTTGGGTG GCTATGTCCT GCTGATTTAT
GTGTTCAACA CCTTTCCGCA GTTTCCCTGG CCCAATTCGC TGAACGTACT GCCGATTATG
GGCCTGCCTT TCCTGCGCTG TGTGCTGAGT TTCAGCGTCG GCATGGTGTT TTATAGCTTA
TATCGGCAGG AGTGGGGGCG GGGCTGGCTC GCTAATGGGT ATGCAACACT GGGTTTTGCT
GGGCTCATGG TCCTGTCGAT GCACCTCGGC TGGTCCGACC TGGTTACCGT CAGCACATTT
CCCTTTATTA TCCTGTCGGC GGCTTACGGC TCTGCTAACG TCAATAAACT GCTGATCACC
AAACCCATGC AGCAACTTGG CGACTTGTCA TTCTCAATTT ACCTGACCAA CGAGCTGGTG
TATGAGACCG GACGCGTGCT GCGTCATGCG TGGGGATTAC CCATAGCGCC CGAAGGCGTG
TCGTACGCCG GTATCTGGCT TTGGTTTTTC GGCTGGCTGG CGGTTGTACT GTTGGTATCG
GCATTGACCT ACCACTTCAT CGAACTGCGC GCCCGTAAGG CACTGAACGC CCGCTTTAAA
AAGCAAGCCG TTTTTGTATC AAATATCCAG CCCGTTTAA
 
Protein sequence
MTSQTNPSYL ANLTPLRGIA ALIVLFFHFD LYWSGPFTGA LLDPAQSHFA QKGYIEVDFF 
FVLSGFIMCH VYGTSFGESV TKTGFWQFMK ARFARIYPLH LFTLLWSILL FAVIISTNFP
LDEREKSVFN LWAIPAHLFM LQGFGVPIGY TWNGPAWTIG VEWWMYVAFP FIFAPLSRLT
HWGKLVLLVV LLGGYVLLIY VFNTFPQFPW PNSLNVLPIM GLPFLRCVLS FSVGMVFYSL
YRQEWGRGWL ANGYATLGFA GLMVLSMHLG WSDLVTVSTF PFIILSAAYG SANVNKLLIT
KPMQQLGDLS FSIYLTNELV YETGRVLRHA WGLPIAPEGV SYAGIWLWFF GWLAVVLLVS
ALTYHFIELR ARKALNARFK KQAVFVSNIQ PV