Gene Slin_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3485 
Symbol 
ID8727238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4217385 
End bp4218260 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content49% 
IMG OID 
ProductUbiA prenyltransferase 
Protein accessionYP_003388292 
Protein GI284038362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCCC GCCAGTCCAT TCCTTTCTCA GCCTATGCAT TCGGCTTTCT GCGACTCATC 
CGGGTGCAGA ATCTGCTGAT TGTAGTATTG ACGCAATTTC TGGCGCGCGT GTTTCTGGTT
GGCCCTAAAA CAGAGGCTAT TAAGTGCCTG ACCGACCCTA CCCTGTGGCT TCTGTCGTTG
TCGACCGTTT GTATCGCAGC AGCCGGTTAC ATTATCAATG ATTATTTCGA TATAAAGATT
GACCTGATCA ACAAACCGGA ACGGGTTGTA ATCGGGCGGT ATCTCAAACG GCGGGTAGCC
ATGGGCGTAC ACCAGGTGCT CAACGTAATA GGCTGTTTGA TTGGTCTTTA TTTGAGCAAA
TGGGTATTTG TGGCTGATGT TGTATCGGTA TCGCTGCTGT GGTTCTACTC GGCCCAGTTT
AAGCGTCAGC CAGCCATTGG AAACATTGTC ATTTCGCTCC TGACGGCCCT TTCCCTCATT
ATTCTGGCGG TTTACTACCG GCAGAATACG GGTATTATTC TTATTTATGC GCTGTTTTCC
TTTGGTCTCT CCTTTATTCG TGAGATCATA AAAGATATGC AGGATATTCG GGGCGATGCC
CGTTTCGGTT GCCGAACACT GCCCATCGTC TGGGGCCTCC GCCGGACAAA ATACCTACTT
TACACCTTGA TCGGCGCTTT CCTGACAAGC CTTTTTATTA TTGCCAACTC CCTGAACAAC
ACACGCCTTA CGTTTATCTT CGGCCTGCTG CTCCTGCCTA TAGCCTGGAT GACCTACCGG
CTTGTTATAG CCGACACCCG ACGCGATTTT GGGTATCTCA GTAACCTCTG TAAATTAATC
ATGCTAATGG GCGTCATCAG CATGATTTGG GCGTAA
 
Protein sequence
MVARQSIPFS AYAFGFLRLI RVQNLLIVVL TQFLARVFLV GPKTEAIKCL TDPTLWLLSL 
STVCIAAAGY IINDYFDIKI DLINKPERVV IGRYLKRRVA MGVHQVLNVI GCLIGLYLSK
WVFVADVVSV SLLWFYSAQF KRQPAIGNIV ISLLTALSLI ILAVYYRQNT GIILIYALFS
FGLSFIREII KDMQDIRGDA RFGCRTLPIV WGLRRTKYLL YTLIGAFLTS LFIIANSLNN
TRLTFIFGLL LLPIAWMTYR LVIADTRRDF GYLSNLCKLI MLMGVISMIW A