Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3485 |
Symbol | |
ID | 8727238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4217385 |
End bp | 4218260 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | UbiA prenyltransferase |
Protein accession | YP_003388292 |
Protein GI | 284038362 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCCC GCCAGTCCAT TCCTTTCTCA GCCTATGCAT TCGGCTTTCT GCGACTCATC CGGGTGCAGA ATCTGCTGAT TGTAGTATTG ACGCAATTTC TGGCGCGCGT GTTTCTGGTT GGCCCTAAAA CAGAGGCTAT TAAGTGCCTG ACCGACCCTA CCCTGTGGCT TCTGTCGTTG TCGACCGTTT GTATCGCAGC AGCCGGTTAC ATTATCAATG ATTATTTCGA TATAAAGATT GACCTGATCA ACAAACCGGA ACGGGTTGTA ATCGGGCGGT ATCTCAAACG GCGGGTAGCC ATGGGCGTAC ACCAGGTGCT CAACGTAATA GGCTGTTTGA TTGGTCTTTA TTTGAGCAAA TGGGTATTTG TGGCTGATGT TGTATCGGTA TCGCTGCTGT GGTTCTACTC GGCCCAGTTT AAGCGTCAGC CAGCCATTGG AAACATTGTC ATTTCGCTCC TGACGGCCCT TTCCCTCATT ATTCTGGCGG TTTACTACCG GCAGAATACG GGTATTATTC TTATTTATGC GCTGTTTTCC TTTGGTCTCT CCTTTATTCG TGAGATCATA AAAGATATGC AGGATATTCG GGGCGATGCC CGTTTCGGTT GCCGAACACT GCCCATCGTC TGGGGCCTCC GCCGGACAAA ATACCTACTT TACACCTTGA TCGGCGCTTT CCTGACAAGC CTTTTTATTA TTGCCAACTC CCTGAACAAC ACACGCCTTA CGTTTATCTT CGGCCTGCTG CTCCTGCCTA TAGCCTGGAT GACCTACCGG CTTGTTATAG CCGACACCCG ACGCGATTTT GGGTATCTCA GTAACCTCTG TAAATTAATC ATGCTAATGG GCGTCATCAG CATGATTTGG GCGTAA
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Protein sequence | MVARQSIPFS AYAFGFLRLI RVQNLLIVVL TQFLARVFLV GPKTEAIKCL TDPTLWLLSL STVCIAAAGY IINDYFDIKI DLINKPERVV IGRYLKRRVA MGVHQVLNVI GCLIGLYLSK WVFVADVVSV SLLWFYSAQF KRQPAIGNIV ISLLTALSLI ILAVYYRQNT GIILIYALFS FGLSFIREII KDMQDIRGDA RFGCRTLPIV WGLRRTKYLL YTLIGAFLTS LFIIANSLNN TRLTFIFGLL LLPIAWMTYR LVIADTRRDF GYLSNLCKLI MLMGVISMIW A
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