Gene Slin_3471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3471 
Symbol 
ID8727224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4203923 
End bp4204840 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content53% 
IMG OID 
Productgliding motility-associated ABC transporter ATP- binding subunit GldA 
Protein accessionYP_003388278 
Protein GI284038348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000514218 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCC GGGTCCAGAA TCTCACTAAA GAATACAATC AGCAAAAGGC TGTAAATCAA 
ATCTCACTCT CCGTATCACC GGGTGAGATT GTCGGTTTTC TGGGGCCAAA TGGCGCGGGT
AAGTCAACGA CCATGAAAAT TGCGACGGGC TACCTCCCTC CCACCGCTGG TACGGTTGAG
GTTAATGGCT TCGATGTTCT GACGCATCCC ATGGAGGTTC GACGTAGTAC TGGCTACCTG
CCCGAGCATA ACCCGCTTTA CCTGGACCTA TACGTGAAGG AATACCTGCG CTTCGCGGGA
TCACTACACG GCATAGGCGG AGTCGATCTA ACCAGACGAA TTACCGATAT GATTGATCTG
GTTGGCCTTG GACGAGAGCA GCACAAGCGC ATCAGCCAGC TTTCCAAAGG ATACCGGCAA
CGTGTAGGTC TTGCGCAGGC CCTGCTGCAC AATCCGCCCG TGTTGATCCT GGATGAACCC
ACAACGGGCC TCGACCCCAA TCAATTAGCG GAAATCAGGC AAGTTATTCG GGAGGTCGGA
CGAGACAAAA CAGTGCTGTT TTCAACCCAC ATCATGCAGG AAGTTGAAGC TATTTGCGAC
CGGGTGATTA TCATTAACCG GGGCCAGATC GTTACCGACC AACCTCTTAG CCAACTTCGG
CGAGCATCGG CGGGCGAAGG TGTTGTCGTT GTAGCCGAGT TTGAACGGGA ACTGGAGGAT
GTAAATCTAC TGGCGTCCGT TCCAGGAGTA GAGCGTGTAG AGCCGTTAAC GAATGGACAG
TACCGCATCA CGGCCACCCC CAACACCGAC TTAAGAGGGG CCATCTTCCG CCTTGCCGCC
GACCGAAACC TCACCCTCGT TGGCCTTCGA CAGCAGGAAA ATTCGTTGGA AGGAATTTTT
AAGGAGTTGA CAAAATAG
 
Protein sequence
MSIRVQNLTK EYNQQKAVNQ ISLSVSPGEI VGFLGPNGAG KSTTMKIATG YLPPTAGTVE 
VNGFDVLTHP MEVRRSTGYL PEHNPLYLDL YVKEYLRFAG SLHGIGGVDL TRRITDMIDL
VGLGREQHKR ISQLSKGYRQ RVGLAQALLH NPPVLILDEP TTGLDPNQLA EIRQVIREVG
RDKTVLFSTH IMQEVEAICD RVIIINRGQI VTDQPLSQLR RASAGEGVVV VAEFERELED
VNLLASVPGV ERVEPLTNGQ YRITATPNTD LRGAIFRLAA DRNLTLVGLR QQENSLEGIF
KELTK