Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3470 |
Symbol | |
ID | 8727223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4202093 |
End bp | 4203778 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | YP_003388277 |
Protein GI | 284038347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0308593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTT TTCGCAAAAA GACCGTAACC CAAATCCTGA GCGATGCCTC CGAAGGTGAG TCGAGCAAAT TAGTAAAGAC GCTGGGCGTC CGCGATTTAA CGTCATTCGG CATTGCGGCA ATCATTGGGG CCGGTATTTT CAGCACCATA GGGCTGGCGA GTTATAATGG GGGGCCTGCG GTATCGCTGT TGTTTGTCTT CACTGCTATT GCCTGCGTTT TCACCGCGTT GAGTTACGCA CAATTTGCCA GTACAGTGCC CGTGAGTGGC AGTGCGTACA CGTATGCCTA CGTGGCGTTC GGCGAAATTT TTGCGTGGGT AATCGGTTGG GCACTTATTC TTGAATATGC GGTCAGCAAC ATGGTTGTGG CCATCTCCTG GTCGGAGTAT TTTACCTCCA TGCTCAGCGG GTTCGGCATT ACGTTTCCTA AATATTTTGC CACGGACTAC GGTTCGGCGT CCCGCGCCTT TGAACTTGTG CAGCAAACAA AACAGGCGGG TACGGCCCTG ACCACCTTAC CTGAAAATAC GCGTCTGTTG GCTGATGCCT ATGCCAATGC GCCTGTTGTG GGCGATCTTC ACATTATAGC CAACTTGCCT GCCGGTGCCA TAACTGCCTT GATCACCGCC CTGGTTTACA TTGGCATTAA GGAATCACGA ACGGCAAGTA ACATACTGGT TGTTCTCAAA CTGGGTGTAA TTGCTTTGGT GATAGGCGTA GGGGCTTTCT ACGTAAAACC GGCAAACTGG TCGCCGTTCG CACCCAATGG CATATCGGGC GTGCTGAGTG GCGTGGCATC GGTGTTTTTC GCCTTTATCG GCTTCGACTC TATTTCAACA ACGGCCGAGG AGTGTAAGAA CCCCCAACGC GATTTACCTC GTGCCATGCT CTATTGCCTG GGGATTTGTA CGGTTCTCTA CGTCTTGATT ACGTTGGTAT TGACCGGTAT GGTAAACTAC AAGGAGTTAG GCGTTAGTGA TCCGCTGGCC TATGTATTCC AGAAAGTAAA CCTCGATTTT GTGGCTGGCG TCATTTCAGT AAGTGCAGTT GTTGCTATTA CCAGCGCGCT GTTAGTTTAT CAGTTAGGGC AGCCGCGTAT CTGGATGACC ATGAGCCGGG ATGGTCTGCT CTGGAAACGG TTTTCCCGGA TTCACCCGGT CTATAAGACA CCTTCATTCG CGACGATTGT CACGGGATTT CTGGTGGCGA TACCCTCGCT GTTCATGGAT CTAAAGTTCT TCGTGGACTT AACCAGCGTT GGCACTTTTT TCGCGTTCAT TCTGGTTTGC GCGGGTATTT TGTATCTGGA TGCCAAAGGG TTGACAGCCC AATCGAAGTT TAAAGTGCCT TATATCAACG GTAAATACAT TATCGGTGTG GTGCTGCTAG CCGTACTGGC GTATGCGTTG ACAAGGCCCG ATGTAAATGT GCTGCAAACG CTGGAGAGCA AACCCCTGCT TGTTGTTTTT TGGGGCGTGT GGGCCGTTCT GGCCATACAG GGATTCCGCT ATAATTTCTC TCTCCTGCCG GTTATCGGTG TGTTGACCAA CCTTTACCTA ATGACCGAAC TGGGCGCCAG CAACTGGCAG ATTTTCGGGA TCTGGTTGCT GATCGGGTTG GTTATCTACT TCTCGTACGG GTTTAGAAAG AGCAAGCTGG GCAGCCGGGA GGCCGCTTCG GTCTAA
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Protein sequence | MSLFRKKTVT QILSDASEGE SSKLVKTLGV RDLTSFGIAA IIGAGIFSTI GLASYNGGPA VSLLFVFTAI ACVFTALSYA QFASTVPVSG SAYTYAYVAF GEIFAWVIGW ALILEYAVSN MVVAISWSEY FTSMLSGFGI TFPKYFATDY GSASRAFELV QQTKQAGTAL TTLPENTRLL ADAYANAPVV GDLHIIANLP AGAITALITA LVYIGIKESR TASNILVVLK LGVIALVIGV GAFYVKPANW SPFAPNGISG VLSGVASVFF AFIGFDSIST TAEECKNPQR DLPRAMLYCL GICTVLYVLI TLVLTGMVNY KELGVSDPLA YVFQKVNLDF VAGVISVSAV VAITSALLVY QLGQPRIWMT MSRDGLLWKR FSRIHPVYKT PSFATIVTGF LVAIPSLFMD LKFFVDLTSV GTFFAFILVC AGILYLDAKG LTAQSKFKVP YINGKYIIGV VLLAVLAYAL TRPDVNVLQT LESKPLLVVF WGVWAVLAIQ GFRYNFSLLP VIGVLTNLYL MTELGASNWQ IFGIWLLIGL VIYFSYGFRK SKLGSREAAS V
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