Gene Slin_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3465 
Symbol 
ID8727218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4198258 
End bp4199310 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388272 
Protein GI284038342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTA AAAATGTCGT CAAGTACCTG GTCTCACTGG CTATTGCCGG GGGTTTACTC 
TGGTTCACAT TCCAGCAAAG TCACCTCGAT GCCGCCGATT TGTGGCAGAA AATAAAAGGG
GCCGATTACC GATGGGTGTT GCTATCGGCG GTGTTTACCA TTATAGCACA CTGGAGCCGG
GCCGAACGCT GGCGTATTTT GCTGGAGCCG GTAATTGCCC AGCGTCCTAC CTCACTCGAT
ACAACCGCCA GCGTACTCAC CGGGTATCTG GCCAATCTGG CGTTGCCCAG AGCGGGTGAG
TTTGTTCGCT GCGGCACGCT CTATAGGTTG TCGAGCGTAC CCGTGAACGT TAGTTTCGGT
GCCGTAGTGG CCGAACGACT CTTCGACTTA TTGATGCTGG TACTGCTGCT GATCGCCACG
TTTGTGCTTG AGTTCGACCG AATTAGTCAG TTTTTCATCG AGTTCCTCGG CGGTAAATTA
CCCAAAGGAT CAAGTGGTTC TGGGATATTA CTGTTTGCTG GAGCAGTTAT TGCAGGTCTG
GCGCTGCTAG TCTGGTTCTT GTTCAACCGC TACCGCGAAG CCCTGGGCCG ACACCCGCTG
TATCAAAAAA TCAGCGCGTT TGTTAAGGGC CTGCTGGATG GGCTGTTGAG CGTTCGGAAA
ATACGCCGAC CGGGGGCATT CGTCTTTCAT ACCCTGCTTA TCTGGACAAT GTATTACCTC
ATGTCCTATA CCTTATTTTT CGCCATGCCC GCCACCGCTA ATCTTGGACC ATTGGCTGGC
CTGACTATTC TGATGGTAGG TACGCTTGGT ATGGCAGCTC CAACACCGGG TGGTATCGGT
TCTTTTCACC TGCTGGTGGG TCAGGTGGCT CTACTCTACG GTCTGACAAG TCAGGATGGA
CAAGTGCTGG CCACGTTTAT CCACGGTGTT TCGACGCTTA TGATTATCAT CCTAGGCATT
TTTGCCCTAT TAGTTGTGCT TCTCCGACGA AACAAGGCAA CCCAGGAAGC CGATGTGCTG
GACGACCCGA AGGCCTTAAG GCTGGAGCCC TAG
 
Protein sequence
MNIKNVVKYL VSLAIAGGLL WFTFQQSHLD AADLWQKIKG ADYRWVLLSA VFTIIAHWSR 
AERWRILLEP VIAQRPTSLD TTASVLTGYL ANLALPRAGE FVRCGTLYRL SSVPVNVSFG
AVVAERLFDL LMLVLLLIAT FVLEFDRISQ FFIEFLGGKL PKGSSGSGIL LFAGAVIAGL
ALLVWFLFNR YREALGRHPL YQKISAFVKG LLDGLLSVRK IRRPGAFVFH TLLIWTMYYL
MSYTLFFAMP ATANLGPLAG LTILMVGTLG MAAPTPGGIG SFHLLVGQVA LLYGLTSQDG
QVLATFIHGV STLMIIILGI FALLVVLLRR NKATQEADVL DDPKALRLEP