Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3458 |
Symbol | |
ID | 8727211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4190800 |
End bp | 4191441 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003388265 |
Protein GI | 284038335 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTAG TCAAGCGAAG AAATCGCCAG ATGACCATGG AGCGTATCTT ACGGGCTATG GGTGAAGTAA TGGCTGAACG TGGCACCGAA AAAGCTGGTA TCAATGCCGT TGCTGACCGG GCTGGTGTGA ATAAAGTTCT TATCTATCGG TATTTTGGCG GTTGGAACGG CTTGCTGGAA GCCTACGTGC ATCGTGGTTT CTTCCTCTCC ATGTTCAACG ATAAATTTCT GGACTCTGTG CCCGACAACG TGGCGCCGGA AGCCCGAAGT AAAGCTTGGT CTGAGTACAC GATTCAGTTT ATGCGGGAAT TCAGAACACG CAAATCGTCT CAGGAACTGA TCCGCTGGGA AATGTCGAAT GGCGAAACCG AATTGGCTCG TCGACTGGCC GACTTTCGGG ATCAGTCGTA TAAGAACATG GTCGCTAAAC TGGCTCCATA CTCTGATTTT GACCCTCTTG CTATTACCAG CCTGATGGTT GCGGCTGTTA CCAATATTGT ACTCACCAGC ACCCAGCGTG ATCATATCGG CGATATCGAT CTCCGCTCCG ATGCCGGTTG GGAGCGTCTG GAAACCGCTA TTCGTCGTAT TTATTCAAGC TTGAATATTG CGCTCGAACG GGAGCAGGCT AAAACCAAGT AA
|
Protein sequence | MKVVKRRNRQ MTMERILRAM GEVMAERGTE KAGINAVADR AGVNKVLIYR YFGGWNGLLE AYVHRGFFLS MFNDKFLDSV PDNVAPEARS KAWSEYTIQF MREFRTRKSS QELIRWEMSN GETELARRLA DFRDQSYKNM VAKLAPYSDF DPLAITSLMV AAVTNIVLTS TQRDHIGDID LRSDAGWERL ETAIRRIYSS LNIALEREQA KTK
|
| |