Gene Slin_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3344 
Symbol 
ID8727097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4043997 
End bp4044635 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID 
Productprotein of unknown function DUF892 
Protein accessionYP_003388153 
Protein GI284038223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0480671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACC TGGCAGATCG TATAGCAAGT TTTTTTAGTG GTAACGATTC CAACACCGAT 
GAAGGATTAC GCGACCTCTT TATTAGTGAG CTGAAAAGCG TTTACTATGC AGAGAAGCGA
GCCGTCGATG CCCTGGGCGA TCAGGCCGAA GCAAGCACAA CGAATGAAGT GCGCAGTGCT
TTTCTGGCCC ATCAGGAGCA AAGCCGTATT CAGGTGGAGC GACTGGAAGA AATTTTCAGG
ATTATCGGCA TCAAAATAGA CACACATCTA TCCGATGGTA TCGACGGGCT GATTGGTGAT
GCGAAACGGG TTATTTCAGA AACAGAATCA GGCTCGTTGA CACGCGATGC CGGGCTAATT
ATAGCGGCCC AAAAGATTGA GCACTATGAA ATTGCAGCCT ATGGATCACT CCTTACATTA
GCGCGCACGC TTGACTTCAG CCAGTCGGCC GAATTAATTG AAAAGACGCT GGAAGAGGAA
AAAGAAGAAG ATCACAAACT GACTATTCTG GCACAATCGT TCGTAAACAA ACGCTCCAAA
GAGGAAGAGG AAAAACACCC CGGCAGCCAC CACGCCAGCC GACCCGTTCC TCATAGCTCC
GACTCAGATA TCACGTTGGG CGGACCACTG GGCGTTTAA
 
Protein sequence
MANLADRIAS FFSGNDSNTD EGLRDLFISE LKSVYYAEKR AVDALGDQAE ASTTNEVRSA 
FLAHQEQSRI QVERLEEIFR IIGIKIDTHL SDGIDGLIGD AKRVISETES GSLTRDAGLI
IAAQKIEHYE IAAYGSLLTL ARTLDFSQSA ELIEKTLEEE KEEDHKLTIL AQSFVNKRSK
EEEEKHPGSH HASRPVPHSS DSDITLGGPL GV