Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3321 |
Symbol | |
ID | 8727074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4018659 |
End bp | 4019714 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003388131 |
Protein GI | 284038201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.358421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTGT CACTTCCAAC AAAAGCACTG CTCTGGGGCA TTGCCGGTAT AGGTGCATGG ACGGCCGTTA AAGCGGCTCT GGGCCAGAAA CGTAAAATTG ACTTTCGCAG AAAAACGGTT TTGATCACCG GTGGTTCACG GGGGCTCGGC CTCGAACTGG CCCGGCTGCT GGCGCAGGAA GGCGCTAACC TGGCCCTGTT GGCCCGCGAT ACTGACGAAC TCGACCGCGC CAAAGTGGAA CTGGAACAAT CCGGTGTTTC GGTGTATACG CTGGTGTGCG ACGTTACGGA CAAAAGTCAG GTTGAACATG CTGCGGAAAA CGTTCGGCAG GCACTTGGTC CGGTCGATGT GCTCATCAAT AATGCCGGTA CCATCATTGT GACGCCTTAC GAACACGCTA CAGAAGATGA TTTCCGGCTG GCGATGGATA CGCATTTCTG GGCTTCGTTC CACATGATCA ATGCCGTACT ACCTCAAATG CTGGCGCGGA GTACAACCAA TAGCCCCGCA GGCATGGCAG GCCGCATTGT GAACATAACC TCGATTGGCG GAAAGCTGGC CGTTCCGCAT CTGCTTCCTT ATTCAACGAG TAAGTTCGCC ATGGTCGGCT ATTCAGAAGG GTTACGGGCG GAGTTGCTCA ACAAAGGTAT TTACGTGACT ACCGTCGTGC CTGGTCTTAT GCGTACCGGC AGTCCGCGAA ATGCTATTTT TAAAGGGCAG AATGAGAAAG AGTATGCGGC TTTCAAGATT AGTGACTCCA TGCCGTTTTT CACCATAGAC TCTACGGATG CAGCCCGTCA GATCGTGGAG GCCTGTCGGT ATGGCGAAGC CGAACGAACC ATTACGTTAT CTGCTAAAGT AGGTGCCGTT CTTCAGGGTT CGGCACCAAA TCTGATGGCC GAAACAATGG CTATCGTTAA TTCGATGGTG CCCGATCCCG GTGGCATCGG TGAGCAGCGG GCAAAAGGTA AAGAAAGCGA AACGGCCCTT TCTGAATCGT TTTTAACAAC TCTTACCGAT CAGGCTGCCG AACGTAACAA CGAATTCGGG AGCTAA
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Protein sequence | MNVSLPTKAL LWGIAGIGAW TAVKAALGQK RKIDFRRKTV LITGGSRGLG LELARLLAQE GANLALLARD TDELDRAKVE LEQSGVSVYT LVCDVTDKSQ VEHAAENVRQ ALGPVDVLIN NAGTIIVTPY EHATEDDFRL AMDTHFWASF HMINAVLPQM LARSTTNSPA GMAGRIVNIT SIGGKLAVPH LLPYSTSKFA MVGYSEGLRA ELLNKGIYVT TVVPGLMRTG SPRNAIFKGQ NEKEYAAFKI SDSMPFFTID STDAARQIVE ACRYGEAERT ITLSAKVGAV LQGSAPNLMA ETMAIVNSMV PDPGGIGEQR AKGKESETAL SESFLTTLTD QAAERNNEFG S
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