Gene Slin_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3316 
Symbol 
ID8727069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4014765 
End bp4015298 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388126 
Protein GI284038196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG TACAAGCTCT ACTCGTCGTC GCTTTTTTAG TCCTTTCTTC AGGTTTATTT 
CAACGCTGTC AGCCAAAAGC CGGTGATCCG GGCCCTAAAG GCGATACGGG CGCAACCGGT
CCTGCCGGCC CGGTTGGCCC AGCAGGACCA GCCGGGCCAA CCGGAACCGC TAACGTCCAG
TATTCGCCCT GGATTTCCAC TACGTTTACG GGAAGCGGGA GTTTATTTAC GGCTAACATA
ACGGCAACGC CGATTACACA GGCGGTGCTG GATAAGGCAG ATGTCCGTGT TTACTGGAAC
GAAGGTGGCC GTATTTTAAG CTTGCCCTAT GCCGAGACAT TTGGCACTAC CACCTTTACG
GTACACCAAC GTATTTATGT AGGACGCATT GAACTAAGAG CGTCTTATCC ACTCACTACC
CAGCAGTTCA GGTATGTTAT TATTCCGGGT GCCGTCAGTG TAAGCGGACG TGTGGCTGCC
ATTGATTACA GCGATTATGC GTCTGTTAAA AAGGCTTTTA CTATTCCCGA CTAA
 
Protein sequence
MKQVQALLVV AFLVLSSGLF QRCQPKAGDP GPKGDTGATG PAGPVGPAGP AGPTGTANVQ 
YSPWISTTFT GSGSLFTANI TATPITQAVL DKADVRVYWN EGGRILSLPY AETFGTTTFT
VHQRIYVGRI ELRASYPLTT QQFRYVIIPG AVSVSGRVAA IDYSDYASVK KAFTIPD