Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3316 |
Symbol | |
ID | 8727069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4014765 |
End bp | 4015298 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388126 |
Protein GI | 284038196 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAGG TACAAGCTCT ACTCGTCGTC GCTTTTTTAG TCCTTTCTTC AGGTTTATTT CAACGCTGTC AGCCAAAAGC CGGTGATCCG GGCCCTAAAG GCGATACGGG CGCAACCGGT CCTGCCGGCC CGGTTGGCCC AGCAGGACCA GCCGGGCCAA CCGGAACCGC TAACGTCCAG TATTCGCCCT GGATTTCCAC TACGTTTACG GGAAGCGGGA GTTTATTTAC GGCTAACATA ACGGCAACGC CGATTACACA GGCGGTGCTG GATAAGGCAG ATGTCCGTGT TTACTGGAAC GAAGGTGGCC GTATTTTAAG CTTGCCCTAT GCCGAGACAT TTGGCACTAC CACCTTTACG GTACACCAAC GTATTTATGT AGGACGCATT GAACTAAGAG CGTCTTATCC ACTCACTACC CAGCAGTTCA GGTATGTTAT TATTCCGGGT GCCGTCAGTG TAAGCGGACG TGTGGCTGCC ATTGATTACA GCGATTATGC GTCTGTTAAA AAGGCTTTTA CTATTCCCGA CTAA
|
Protein sequence | MKQVQALLVV AFLVLSSGLF QRCQPKAGDP GPKGDTGATG PAGPVGPAGP AGPTGTANVQ YSPWISTTFT GSGSLFTANI TATPITQAVL DKADVRVYWN EGGRILSLPY AETFGTTTFT VHQRIYVGRI ELRASYPLTT QQFRYVIIPG AVSVSGRVAA IDYSDYASVK KAFTIPD
|
| |