Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3314 |
Symbol | |
ID | 8727067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4011346 |
End bp | 4013766 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | protein of unknown function DUF214 |
Protein accession | YP_003388124 |
Protein GI | 284038194 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGTA ATTACATTAA AATTGCGTTT CGTAACCTCT GGAAAAGCAA AGGCTACGCA GCTATCAACG TGGTTGGCCT TTCGGTAGCT TTCTGCGTCT GTACGTTTTT ATTCCTGACG GCTTACTTCC AGCTTAGTTA TGATTCCTTT CACGCAGATG GTGACCGTAT CTTTCAGGTT TATCTGTTCT CGAATGACCC CGAGAAGGCA AGCGCTTCGC CTACAGTTCC CTTGCCCCTT ACCCCGGCCT TAAAAGCCGA TTTTCCGGAG ATTGAAGCAG CCGCCCGCCT GATGAATGGC AGCAATGTGG TAGCCTACAA AGGGAAATAC TTCGATAAAC AGATTATGTT TACCGATCCG GACTTCCTTC GGTTATTTTC CTTTCCGCTG ATTCAGGGCA ACAAGGCAAC GGCACTCAAC GACCGAAGCA ACATTGTTAT CAGCCAGCAA ATGGCGAAAG CCGTATTTGG TACCGAAGAC CCAATGGGCA AACGTCTGCT CCTGGGGCCC GACGGCAGTC AGAAAGAATT TATCGTTACC GGGATTCTGG GGGACTTCCC GAACAATTCA TCTATTCAAT ACGATGCGTT TGTTCAAATA ACAAACGCCG GTAACTACCA GACAGACAAG GACAAATGGG ACGCGATGTC TCACGTCACG TTTGTCAAAT TGGCCCCCAA CGTCGACCGG GCTACCGTTG AAAGCCGGCT GAAACCCTTT GCCGGAAAGT ACTTTCAAGG CACCATTGAC AACTTAAAAA AGAAGGGTGC CAAGCCCGAC GAGCGGGGCG ATTTGTTTGC AGTACGGTTA CAAACGCTGG CCGATATACA CTTCGACAGA GAGTTGGGCG GTGGCACTGG CACCCCCATT GCGCTGGTGT ATGCGCTGAT GGGTATCGGC TTTTTTATTC TGCTGATTGC CTGCATCAAC TTCATCAACC TGAGCGTTGC CCGGTCGTTC ACCCGCGCCA AAGAGGTGGG CGTTCGAAAA TCACTCGGGG CGCTCAAAAA TCAACTTTTT ATCCAGATAT GGGGCGAAGC CGCGATCATT TGCTTTACCG GTTTTTTGGC TGGTCTGGTG CTTACTTACC TGTTGTTACC CATCTTTAAT ACTACATTTC AGAGCAAGCT GACGCTGGAA TACATCAGAC AGCCCAACCA GATTGCCCTC ATGCTGGGCG TTTTTGCACT GGTCACAATC ATTGCGGGCG GGTACCCGGC CTGGCAGATG ACGAAGTTCA ACGCCGTCGA CGTACTGAAA GGTAAAATCA CGATGAAACG GCCCGGCTTT CTCCGCAACT CGCTCATCGT AACGCAGTTT GCTCTGTCGA CCCTGCTTAT CTGCTGCACG ATCATTGCCA TTCAGCAGGT GAGCCACATG CGTCAGCAAC CGCTGGGCTT CCAGAAAGAG CAGGTGATCA GTATACCCGT GGGTAACAAA GCCGACGGCC AGCAGGTGCT TAAGCGAATG CGAAACACAT TGGCAAACGA CCCCACTATT ATTTCGATAA CCGGAACTGG GGTGAATCTG GGCTTGGGTA AGGACAGGAG TACATCGAGG TCAATCATGG GCTTTACCTA CAAGGATCGG GATATCTCAA CCGACTGGCT GCAAATAGAT TACGACTACC TCAAGACCCT CGACATTAAG CTCCTGGCGG GCCGAGAATT CAACCCGGCC TACCCATCCG ATTCGCTGGA CCGAGTGGTC ATTACCGAAA GTATGGCCAA AATGATTGGC GAGAAAAACC CCGTTGGCAA GTATTTCCAG ACCGACAGCG CAGGGGTGAA ATACCAAATC ATCGGGTTGG TCCCTGATTT TCATCTGTAC TCGTCTAAGA GCGAGCGAAA GCCAATTACC ATGTACCTGG CTCATTCGCA GCCCATCAGC TACATCTTTG TTCGGGTGGC ACCGCAACGT CTGGCAGGGG CTATGGATAA ACTCAAAGCG GTCTGGAAAG AGGTCGCTCC CCGGTCGGAG TTCATTGGCT CCTTTCTCGA TGAGAACACA AATGCCTGGT ATAAGGATGA AGAAAAGCTC TCGCAATTAT TTACACTCGC TTCGGGCATT GCTATTCTTT TATCCTGCCT GGGCCTCTTT GCCGTGGCGT TGATGGTGAT TGAGCAACGT ACCAAAGAGA TCGGCGTCCG CAAAGTGCTG GGGGCCAGTA TTCCGAATAT TGTCTTTATC CTGTCGCAGG ACTTTGTACG GCTGGTTGTG CTGGCCATTG TTATCGCCAC GCCCCCAGCC TGGTTTTTCA TGCAGAAATG GCTGGACAGC TATTCGTATC GTATTGAAAT TAGTGTCTGG ATTTTCATTC TAGTGGGCCT GGCCGCCATT TTCATCGCAC TGGTTACGGT CAGCTTCCAC AGCATAAAAG CGGCTTTAAT GAATCCGGTA AAGAGTTTAC GAACGGAATA A
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Protein sequence | MLSNYIKIAF RNLWKSKGYA AINVVGLSVA FCVCTFLFLT AYFQLSYDSF HADGDRIFQV YLFSNDPEKA SASPTVPLPL TPALKADFPE IEAAARLMNG SNVVAYKGKY FDKQIMFTDP DFLRLFSFPL IQGNKATALN DRSNIVISQQ MAKAVFGTED PMGKRLLLGP DGSQKEFIVT GILGDFPNNS SIQYDAFVQI TNAGNYQTDK DKWDAMSHVT FVKLAPNVDR ATVESRLKPF AGKYFQGTID NLKKKGAKPD ERGDLFAVRL QTLADIHFDR ELGGGTGTPI ALVYALMGIG FFILLIACIN FINLSVARSF TRAKEVGVRK SLGALKNQLF IQIWGEAAII CFTGFLAGLV LTYLLLPIFN TTFQSKLTLE YIRQPNQIAL MLGVFALVTI IAGGYPAWQM TKFNAVDVLK GKITMKRPGF LRNSLIVTQF ALSTLLICCT IIAIQQVSHM RQQPLGFQKE QVISIPVGNK ADGQQVLKRM RNTLANDPTI ISITGTGVNL GLGKDRSTSR SIMGFTYKDR DISTDWLQID YDYLKTLDIK LLAGREFNPA YPSDSLDRVV ITESMAKMIG EKNPVGKYFQ TDSAGVKYQI IGLVPDFHLY SSKSERKPIT MYLAHSQPIS YIFVRVAPQR LAGAMDKLKA VWKEVAPRSE FIGSFLDENT NAWYKDEEKL SQLFTLASGI AILLSCLGLF AVALMVIEQR TKEIGVRKVL GASIPNIVFI LSQDFVRLVV LAIVIATPPA WFFMQKWLDS YSYRIEISVW IFILVGLAAI FIALVTVSFH SIKAALMNPV KSLRTE
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