Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3312 |
Symbol | |
ID | 8727065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4006804 |
End bp | 4010484 |
Gene Length | 3681 bp |
Protein Length | 1226 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_003388122 |
Protein GI | 284038192 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGGT CTGCCAAAAC CAAAGATGAA CTGGTAGCCG AAATTCAACG GCTACAGCAC GAACGAAACG AAGTAGCCGT AACCGATGCG CTGCCCGCCT TCGATGTTCG CCAAACGGTT GACCAACTTA ACCTGGTTGG CTTAACCATC GAGCGCGACG GAACGCTGAG CTATGCTAAC CCGTATACCT ACCGCGTCAC CGCCTGGCAA CCGGAGCACA TCATCGGCCA GAACTTTTTC GACATTTTTA TTCCCCCTGC CGAACGCGCC AAACTCGAAG CCGAATTTGA AGACGCCCTC ACCAAAGGCG GCTTTCCCGA GCAGAAAGAA ATTACGCTGC TGGCTCGTTC AGGTGCTTTG CGCAATGTAC AAGTCAACTC ATTCATAATC AATGGTGCCG ATGGCCACGT TTCATCATTC ACCCTAATTG GTGAAGATGT AACGAACAAA CGACGGGTTG CCTCAGCTCT GTCGAATACC AATGCCCAAC TACAGGACCT GGTCGATAAT ACCTCTGACC TGATTCAGCT GCTGACCCTC GACGGTAAGT TCATCTTCGT AAACCGGGCC TGGCGCGAAG CACTGGGCTA TAATTCCGAC GAAATATCAG CCTTAAACCT GCGCGACGTT CTTCATCCCG ATTATGCCGA CAGCACCCTT GGGCTGCTCA AACGAATTCA GGAAGGCGAC AAACTGCCGT ATGTGGAAAC GGTCTTTCGG ACAAAAAGTG GCAAAACCCT GTTCCTGTCG GGGAGCGTCA ACTGCCGGTT CGACAACGGC CGGCCAACGG CTTTCCGGTG TATACTGCAC GATACAACAG GCAAAATACG GGCCGAAAAA TCGCAGAAGC TGTATTACAG CATCGCCAAC TGGACTATCA ATACGCCCAA CCTCGGCGAG TTTTATCACA AAATTCATGA AGAGCTGGGG AACATCATTG ATGCGCGCAA CTTTTTCATT GCCCTGTACG ACTCCAGCAA AACGTACCTG TCGTTTCCGT ACTACGTCGA TGAGTACTTT GGCGGCAACA TGCGGTTTAC GAAGCGTAAG CTGGGAAATG GCCTGATTGA ATACACCATT CTGGCCAATA AGCCTTTGTT CCTTTACGAA AAGGATATCC GCAAACTGGC CGACCAGCAC CAGGTCGACC TCTATGGCCA GCTTCAGCCA CAGGTGATGC TGACGGCCCC GCTCCGGATC GGTGAAGAAA TCACGGGCAT CATCGGTGTG AAATCGTACG ACGACGCGCA AACCTACGGC CCCCGCGACC TCGAATTACT CGAATTCATA TCGGGCCAGG TGGCGCTGGC GATTGCCCGC AAACAGTCGG AAGCTCGACT CGACAAACAG AATGCCCGCC TGAATGCAAT CTTCGACAGC AGTACCTACT TGATCTGGTC GGTTAATAAG GCGTTGAAAC TGACGTCGTT CAACAAAAAC TATACCCGTC TCATCGAGTA TCAGCTAAAT GAATCGCCGT CCATTCAGGC TAGTGCCCCC GACCTCGGCT GGCGAATGAT TGGAGCGGAT AATCGTAAAA ATCTGGAAGA CCGATACCGG CAGGCATTCC GGGGCTTTGC CCAGAATTTT GAGCTGTTCT TCGAAACGCC CAAAGGCGAG ACCTACCTAG AATTTCACCT TAACCCGATT TTGCTGGCGG GGGGCGTCAT TGACGAGGTG TCAGGTATTG CCCGCGACAT TACCAACCGC AAACGGGCCG AAATTGCTAC CCGGCAGAGT GAAGAGAAAT TCCGGGGTAT TTTTGAGAAT TTACAGGATA TCTACGCCCG CGTAGACCGT AAAGGACGTA TAACCATGAT TAGCCCGTCG GTATTCAAAC GCATGGGCTA TACGCCGGAC GAAGTACTGG GGCAGGAGAT CACCCGGTTC TTCATCGACG AGAACGACAT CCGGCACGCC ATGTTCAAAC TCGGCCGCAA CCGCAGTCTC CGGAATTTCG AAGCCAGTAT GCGCCGTAAA GATGGTAGCG AGCGGCAGTT TATGTTCAAC ATGCTGATGC TGAACGAAGG GCCCGGCAGT GACTCCGTGG TGGCCGTGCT GGCCCGCGAC ATCACCGAAC TGAAACGACA ATCGGCCGAG TTGGTAAAAG CTAAAAACGA AGCCGAACGG TCATTGAAGG TGAAAGAACA GTTTCTGGCC AACATGAGCC ACGAAATCCG GACACCCATG AACGGGGTTA TCGGCATGAT TGACCTGCTC AACGATACCA AACTGGACGA AGAGCAGCGC AGTTACGTCA AAACGGTAAA ACGCTCGTCG GAGACACTGC TGAATATCCT GAACGATATT CTGGACTTGT CGAAAATTGA AGCGGGGAAA ATGGTACTCC ACGAAGCGCC GGTGGCCTTC AAAGAGATTT TCGAGAAACT TATCGCACTG TTCGGTCAGC AGGCTAATTC GAAAAACAAT GAACTGACGT ATCATCTCGG CTCCGACCTG CCCACCTTCG TTATTGCCGA CCAAACGCGA CTGCTACAGG TATTATCGAA CCTGACCTCC AACGCGATCA AATTTACGGA AAATGGCACC ATCCGGGTGG AGGCTTCTCT GATTAGCAAA CGGGGCAAAT TCAACCGGAT TCGCATTGAG GTGAAAGATT CAGGGATTGG TATTTCGCAA CAGAACATCA ACCTGCTGTT CAATTCGTTC AGTCAGGTCG ACACCTCATC GCGGAAATCG TTTGGTGGCA CGGGCCTGGG CCTCGCCATT TCCAAAGAGT TGGCCAGCCT CATGAAAGGT GAAATCGGTG TCGACTCAAC CGTGGGCATG GGCAGTACCT TCTGGTTCAC CATTGAACTG AAGGAAACCA GCATCAGCCC CACCCAGCAA ACGACGGAAG TAGCTGAAAT AGCCCTTGCC AATTTCTTCA GCACCTACCA CCCCAACGTG TTGCTGGTAG ACGACAACGC CGTAAATCGC AAAGTTGCCA GCGAAATTCT GCGCAAAGCT GGCTGCGTCG TCACAACGGC CGACAGCGGA CCGGCAGCCA TCAGCGAGGT GGAAAAACGG GTAACGGATG CACAGCCGGG CTTCGATGTT ATTTTCATGG ACATTCAAAT GCCCGATATG GACGGTGTGG AAACTACCCG CAACCTGCGC AAGCAGTTTG GTAACAAGCT GCCAACCATT GTTGCCATGA CGGCCTACTC GATGCGCGAG GACCGCGAGC GGTTTATCAG TCAGGGGCTG GACGATTACA TTGCCAAACC CATTCGTGCC CAGAGCCTGA TTGCCAAAGT GAAGGAACTG ACCGACGCTA ATCAGGCCCG ACAGCAGTCG GAAACACCCA AAGCATCGAA ACCAGCCCCC TCCCCACTGG TAGACCCTAA ATTGCCGGTT ATTGACGAAG ATATTGTCGG GCAGCTTCGG GATATTGGCG GGCAGGACCT CGTTGACAGC ATCATGGAGG AGTTCGTAAC AGAAGCCAAT GATCTGGTTA CGGGGGCGCT CTCGGCCTAC GACCTTGGGG ATATTCCAAC GGTAAAGAGT CATCTGCACA CGTTAAAGGG CAGTGCCGGA ACGATTGGCG TGGCCCGCGT AGCCGAGATT TCCCGTACTG CCGAAGGCAA GCTCAAAGTG AATGATACCA GTGGATTAGC CGACGCGCTC CAGGCACTGA AACTGGCGTT CGAAGAGTTC CTGACCACCT GGAAGAAGTA A
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Protein sequence | MRWSAKTKDE LVAEIQRLQH ERNEVAVTDA LPAFDVRQTV DQLNLVGLTI ERDGTLSYAN PYTYRVTAWQ PEHIIGQNFF DIFIPPAERA KLEAEFEDAL TKGGFPEQKE ITLLARSGAL RNVQVNSFII NGADGHVSSF TLIGEDVTNK RRVASALSNT NAQLQDLVDN TSDLIQLLTL DGKFIFVNRA WREALGYNSD EISALNLRDV LHPDYADSTL GLLKRIQEGD KLPYVETVFR TKSGKTLFLS GSVNCRFDNG RPTAFRCILH DTTGKIRAEK SQKLYYSIAN WTINTPNLGE FYHKIHEELG NIIDARNFFI ALYDSSKTYL SFPYYVDEYF GGNMRFTKRK LGNGLIEYTI LANKPLFLYE KDIRKLADQH QVDLYGQLQP QVMLTAPLRI GEEITGIIGV KSYDDAQTYG PRDLELLEFI SGQVALAIAR KQSEARLDKQ NARLNAIFDS STYLIWSVNK ALKLTSFNKN YTRLIEYQLN ESPSIQASAP DLGWRMIGAD NRKNLEDRYR QAFRGFAQNF ELFFETPKGE TYLEFHLNPI LLAGGVIDEV SGIARDITNR KRAEIATRQS EEKFRGIFEN LQDIYARVDR KGRITMISPS VFKRMGYTPD EVLGQEITRF FIDENDIRHA MFKLGRNRSL RNFEASMRRK DGSERQFMFN MLMLNEGPGS DSVVAVLARD ITELKRQSAE LVKAKNEAER SLKVKEQFLA NMSHEIRTPM NGVIGMIDLL NDTKLDEEQR SYVKTVKRSS ETLLNILNDI LDLSKIEAGK MVLHEAPVAF KEIFEKLIAL FGQQANSKNN ELTYHLGSDL PTFVIADQTR LLQVLSNLTS NAIKFTENGT IRVEASLISK RGKFNRIRIE VKDSGIGISQ QNINLLFNSF SQVDTSSRKS FGGTGLGLAI SKELASLMKG EIGVDSTVGM GSTFWFTIEL KETSISPTQQ TTEVAEIALA NFFSTYHPNV LLVDDNAVNR KVASEILRKA GCVVTTADSG PAAISEVEKR VTDAQPGFDV IFMDIQMPDM DGVETTRNLR KQFGNKLPTI VAMTAYSMRE DRERFISQGL DDYIAKPIRA QSLIAKVKEL TDANQARQQS ETPKASKPAP SPLVDPKLPV IDEDIVGQLR DIGGQDLVDS IMEEFVTEAN DLVTGALSAY DLGDIPTVKS HLHTLKGSAG TIGVARVAEI SRTAEGKLKV NDTSGLADAL QALKLAFEEF LTTWKK
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