Gene Slin_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3272 
Symbol 
ID8727025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3954068 
End bp3955276 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content51% 
IMG OID 
ProductParallel beta-helix repeat protein 
Protein accessionYP_003388082 
Protein GI284038152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTC CTTTACTCCT GGTTACGTGT CTGTTAACGT ACACAGCCTG GGCGCAAACC 
GATGTACAGA AGCGCTACCA GACGCGGCTC ATCATGGCCG AAGACGGCAG CACGATAGAC
CTCGATGCCG GTACGTTCAC CTTTACCGGA AGCCTATCAC TGGAAGATAA AAAGCGAATC
GTAATCCGGG GAAAAGGCAT CGACAAAACC ATACTCAGTT TTAAGGGGCA GACGGACGGT
GCAGAAGGGT TTCGGGTGTC CAATGCGGAG AATATCGTTA TTGAAAATCT GACTATTCAG
GATTCGAAAG GCGATGGCAT CAAGACCATG AACGTGAAGG GCATCACCTT CCGCAATGTA
AAAGTGGAAT GGACAGGCCC ACCCAAAGCC GAAAATGGCG GCTACGGCCT GTATCCGGTA
CAGTGCGACA ATGTGCTCAT CGACGGTTGT ACCGCCATTG GTGCTTCCGA CGCCGGTATT
TACGTTGGGC AGTCGCGCGG TATTGTCGTC AAAAACAGCA AAGCCTACCA TAACGTAGCC
GGTATCGAGA TTGAAAACTC CCGCAATGCC GATGTTTTCG ATAACGAAGC ATACGAAAAT
ACGGGCGGCA TTCTGGTTTT CGACCTGCCT GATCTGGTCC AGAAACAGGG CGGTAATGTG
CGGGTGTTCA ATAACCACAT CCACGACAAT AACTTTCCGA ATTTTGCGCC GGAAGGCAAT
ATCGTAGCCA GTGTATCGGA TGGTACGGGG CTGCTGATTC TGGCCGCCAA TAACGTTGAG
GTGTTCAACA ACCGCTTTCT CCGCAATCAG ACCATTGGCA CCGGCATCAT CAGTTACCTA
ATTACCGAAC GGCCCATCAC CGACAAGGGC TATTACCCAT TTTCGACGGC TATTTCCATT
CACGATAACG TATACGAGCG CAACCCCGGT CCCGCCAGTT CGCGGGGGCG ATACGGCAAA
ATATTCGATG CTATCTTAAA GGCCGGTCAG CCCGTTCCGC ACATTTTGTA CGACGGCATT
GCCGACCCTG CCACCTTCGA TAAAGATGGT AAACCACTGG CCGACAAACG TATCTGTATC
CGAAACAACC GGAACCAGAG TGTCGTAAAT CTCGACGCTG GGCGTGAATT TAAAAACGTT
TCTTTCAGCC CAACGCCTTT TGATTGTCAG TTAACTCCCT TAAAAATAAC CGCTGGCAAC
GGCCGCTAA
 
Protein sequence
MKLPLLLVTC LLTYTAWAQT DVQKRYQTRL IMAEDGSTID LDAGTFTFTG SLSLEDKKRI 
VIRGKGIDKT ILSFKGQTDG AEGFRVSNAE NIVIENLTIQ DSKGDGIKTM NVKGITFRNV
KVEWTGPPKA ENGGYGLYPV QCDNVLIDGC TAIGASDAGI YVGQSRGIVV KNSKAYHNVA
GIEIENSRNA DVFDNEAYEN TGGILVFDLP DLVQKQGGNV RVFNNHIHDN NFPNFAPEGN
IVASVSDGTG LLILAANNVE VFNNRFLRNQ TIGTGIISYL ITERPITDKG YYPFSTAISI
HDNVYERNPG PASSRGRYGK IFDAILKAGQ PVPHILYDGI ADPATFDKDG KPLADKRICI
RNNRNQSVVN LDAGREFKNV SFSPTPFDCQ LTPLKITAGN GR