Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3272 |
Symbol | |
ID | 8727025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3954068 |
End bp | 3955276 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Parallel beta-helix repeat protein |
Protein accession | YP_003388082 |
Protein GI | 284038152 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTTC CTTTACTCCT GGTTACGTGT CTGTTAACGT ACACAGCCTG GGCGCAAACC GATGTACAGA AGCGCTACCA GACGCGGCTC ATCATGGCCG AAGACGGCAG CACGATAGAC CTCGATGCCG GTACGTTCAC CTTTACCGGA AGCCTATCAC TGGAAGATAA AAAGCGAATC GTAATCCGGG GAAAAGGCAT CGACAAAACC ATACTCAGTT TTAAGGGGCA GACGGACGGT GCAGAAGGGT TTCGGGTGTC CAATGCGGAG AATATCGTTA TTGAAAATCT GACTATTCAG GATTCGAAAG GCGATGGCAT CAAGACCATG AACGTGAAGG GCATCACCTT CCGCAATGTA AAAGTGGAAT GGACAGGCCC ACCCAAAGCC GAAAATGGCG GCTACGGCCT GTATCCGGTA CAGTGCGACA ATGTGCTCAT CGACGGTTGT ACCGCCATTG GTGCTTCCGA CGCCGGTATT TACGTTGGGC AGTCGCGCGG TATTGTCGTC AAAAACAGCA AAGCCTACCA TAACGTAGCC GGTATCGAGA TTGAAAACTC CCGCAATGCC GATGTTTTCG ATAACGAAGC ATACGAAAAT ACGGGCGGCA TTCTGGTTTT CGACCTGCCT GATCTGGTCC AGAAACAGGG CGGTAATGTG CGGGTGTTCA ATAACCACAT CCACGACAAT AACTTTCCGA ATTTTGCGCC GGAAGGCAAT ATCGTAGCCA GTGTATCGGA TGGTACGGGG CTGCTGATTC TGGCCGCCAA TAACGTTGAG GTGTTCAACA ACCGCTTTCT CCGCAATCAG ACCATTGGCA CCGGCATCAT CAGTTACCTA ATTACCGAAC GGCCCATCAC CGACAAGGGC TATTACCCAT TTTCGACGGC TATTTCCATT CACGATAACG TATACGAGCG CAACCCCGGT CCCGCCAGTT CGCGGGGGCG ATACGGCAAA ATATTCGATG CTATCTTAAA GGCCGGTCAG CCCGTTCCGC ACATTTTGTA CGACGGCATT GCCGACCCTG CCACCTTCGA TAAAGATGGT AAACCACTGG CCGACAAACG TATCTGTATC CGAAACAACC GGAACCAGAG TGTCGTAAAT CTCGACGCTG GGCGTGAATT TAAAAACGTT TCTTTCAGCC CAACGCCTTT TGATTGTCAG TTAACTCCCT TAAAAATAAC CGCTGGCAAC GGCCGCTAA
|
Protein sequence | MKLPLLLVTC LLTYTAWAQT DVQKRYQTRL IMAEDGSTID LDAGTFTFTG SLSLEDKKRI VIRGKGIDKT ILSFKGQTDG AEGFRVSNAE NIVIENLTIQ DSKGDGIKTM NVKGITFRNV KVEWTGPPKA ENGGYGLYPV QCDNVLIDGC TAIGASDAGI YVGQSRGIVV KNSKAYHNVA GIEIENSRNA DVFDNEAYEN TGGILVFDLP DLVQKQGGNV RVFNNHIHDN NFPNFAPEGN IVASVSDGTG LLILAANNVE VFNNRFLRNQ TIGTGIISYL ITERPITDKG YYPFSTAISI HDNVYERNPG PASSRGRYGK IFDAILKAGQ PVPHILYDGI ADPATFDKDG KPLADKRICI RNNRNQSVVN LDAGREFKNV SFSPTPFDCQ LTPLKITAGN GR
|
| |