Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3263 |
Symbol | |
ID | 8727016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3943175 |
End bp | 3944155 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003388073 |
Protein GI | 284038143 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.380473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA TATCCATTCT TGTACCGAAA GGTGCTATTT TAGGTAGTCT GGAAGGAACA CGACAGCTAT TTACCGAGGT AAATCAGTTT TGTAAAATGC GGGGTGAAAA ACCGTTATTT TCAGTCCAGT TGGTTGGTCT TTCGCGAGAG ACGCCGGTGA GTGGAGGCTT GTTTACGGTA CACGCCGATT CGCTGATCGG GGACATAAAA AAAACAGATT TAATTATTAT TCCCGCCCTG GATGGTGAAC TGGAAAATGC CATCGAAAAA AACAGAGATT TTATTCCCTG GATACTCAAA CAGCGCAGCA ATGGTGCCGA AGTTGCCAGC CTTTGTCTGG GAGCTTTTCT ACTGGCATCG ACGGGCCTGG TAAACGGCCG AAAATGCGCT ACGCACTGGC TGGCGGCCAA TCAATTCCGG CAGCTGTTTC CCGAAGTCGA CCTGGTGCCG GAGAAGATCA TTACCGACGA ACAGGGCATT TATTCCAGTG GCGGGGCATT CTCGTACCTG AACCTGATTT TGCACCTGAT CGGGAAATAC GCCGGTCGGG AAATTGCTGT TCTTGCAGCT AAAGTTTTTG CAATAGAAAT CCAGCGGGAT AACCAATTGT CGTTCACTAT TTTCCAGGGA CAAAAGGAAC ACGAAGACGA GCCAATTCGG AAAGCGCAGG AGTTCATCGA ACAGAATTTT CAGGAACGGA TTTCGGTCGA TGAACTCGCG TCAAAATTCG CATTGGGTCG GCGAAATATG GAGCGCAGGT TTAAGAAAGC CACCGCCAAT TCAGTCAATG AATACATGCA GCGGGTGAAA ATTGAAGCAG CCAAAAAAAG CCTGGAAACC AGCCGAAAAA CAGTCAATGA AATTATGTAT GACGTTGGCT ATTCGGACAC TAAAGCATTT CGAACAATTT TCAAACGAAT CACCGGATTA TCACCCGTCG ATTATCGGAA TAAATACAAC AAAGAGTTAG TAGACGCGTA G
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Protein sequence | MKHISILVPK GAILGSLEGT RQLFTEVNQF CKMRGEKPLF SVQLVGLSRE TPVSGGLFTV HADSLIGDIK KTDLIIIPAL DGELENAIEK NRDFIPWILK QRSNGAEVAS LCLGAFLLAS TGLVNGRKCA THWLAANQFR QLFPEVDLVP EKIITDEQGI YSSGGAFSYL NLILHLIGKY AGREIAVLAA KVFAIEIQRD NQLSFTIFQG QKEHEDEPIR KAQEFIEQNF QERISVDELA SKFALGRRNM ERRFKKATAN SVNEYMQRVK IEAAKKSLET SRKTVNEIMY DVGYSDTKAF RTIFKRITGL SPVDYRNKYN KELVDA
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