Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3207 |
Symbol | |
ID | 8726960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3885157 |
End bp | 3886200 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003388017 |
Protein GI | 284038087 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00238507 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.252728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAAT TCGACCTATC TATTGAATAC CGCATCATCG TCGGCATCTC AGCGATGGTT TTACTGTTCA GCGGCTTCCT CATATCCTTT ATAACGTCGC AACGAAAAAA AATTCAACAT CATAGAGAAG TGGAATTGCT GCATGAGCAA CAAAAGAAAC TACTCATGCA GCAAAATGAT CAGTTAGAGC AGCGGGTTAA GGAGAGAACC ACAGAATTAA GAGAGCAAAA AGAAGCATTG CAGATTTCTC TCACAGAGCT CAAGTCGACA CAGATGCAGT TAATTCAGAA GGAGAAGTTG GCGTCACTTG GCGAACTGAC GGCTGGCATT GCTCACGAAA TTCAAAATCC GCTTAACTTC GTAAAAAACT TTTCGGAATT ATCCATCGAG TTCATTAGTG AGTTAAAGCA GGAAGTCAGG GCGGGTAACG AAAAAAGTGT GCTTGACCTT GCCGAAATAC TTTCTAAGAA CCTGGAAAAA ATTAGTACAC ACGGCAACCG GGCCAGCCGC ATTGTAAAAG GTATGCTCGA ACACTCTCGA TTGAGTTCCG GTGAACGGAG GCCCACCGAC CTAAATGCGT TAGTTGATGA GTATGTAAAA TTGGCGTACC ACGGTTCACG AGCTAAGGAT AACGAGTTTA CGTGTAAGCT TGTAACCGTC CTCGACCCAA AGCTAGTCAA ATTCAACATT ATCCCTCAGG AGATCGGCCG CGTGTTGCTA AACTTATTAA ACAACGCTTT TTACGCTGTA CGGGAAAAAA AGAAAAACGC AGATCCCTCC TACCAACCTA CAGTTACGGC AAGTACTGCA TTGATCGATA ATCAGGTTGA AATTCGGGTA CTCGACAACG GAATTGGGAT ACCGGATTCA ATTAAAGCCA AAATATTCCA GCCCTTTTTC ACCACAAAAC CCACCGGAGA GGGCACTGGT CTCGGCCTAT CGCTAAGCTA TGACATCATT ACCAAAGGCC ATAACGGTGG ACTAGAAGTG AAAACCGAAG CAGATGGAGC CACTGAGTTT ATTATTCAAC TCCCCCTTGC TTAG
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Protein sequence | MYQFDLSIEY RIIVGISAMV LLFSGFLISF ITSQRKKIQH HREVELLHEQ QKKLLMQQND QLEQRVKERT TELREQKEAL QISLTELKST QMQLIQKEKL ASLGELTAGI AHEIQNPLNF VKNFSELSIE FISELKQEVR AGNEKSVLDL AEILSKNLEK ISTHGNRASR IVKGMLEHSR LSSGERRPTD LNALVDEYVK LAYHGSRAKD NEFTCKLVTV LDPKLVKFNI IPQEIGRVLL NLLNNAFYAV REKKKNADPS YQPTVTASTA LIDNQVEIRV LDNGIGIPDS IKAKIFQPFF TTKPTGEGTG LGLSLSYDII TKGHNGGLEV KTEADGATEF IIQLPLA
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