Gene Slin_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3108 
Symbol 
ID8726861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3771911 
End bp3772987 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID 
Productglycosyl transferase family 9 
Protein accessionYP_003387918 
Protein GI284037988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCT GGAAAGACGG GCTGCGTCTG TTGTGCGTCA GGCTGGATAA TCTGGGCGAT 
GTACTGATGA CGACACCGGC CTTTCGCGCC ATAAAAACGA CCTGGCCAGC TACCCATCTG
ACGCTGCTGA CTTCGTCGGC GGGAGCGGCT GTTGCGGAGC TGGTGCCCGA CATTGACCAG
GTGCTGTCGT TCGATGTGCC CTGGGTGGCC GGGCAGCAGC AGCAACCGGA CCGGGTTGTT
GCTCTGGCCG ATTGCTTACG CGGTCACAAC TTCGACGCTG CCATCCTGTT CACCGTGCAG
AGTCAGAATC CGCTGCCGAC GGCCATGCTC TGTTATCTGG CCGGCATTCC CCGCGTACTG
GGCTATTGCC GGGAGAATCC GTACCAGCTT ATAACAGACT GGGTTCCCGA TCCCGAAATA
TTGGTGGCTA CCCGGCACGA GGTTGTTCGG CAACTGGAAC TGGTGCGGGA AATTGACTGC
CACACCACCA ACCGTCGCCT TTCCCTGACG CCATCCGTAG CCGATCAGCA ACGGGTGCGC
CAGCAGGTAG CCAATGCCGG ACTCGACTTT CAGCGCCCCT GGCTGGTGGT GCATCCGGGC
GTTAGTGAAG AGAAACGGCG GTACCCGGCT GAAAAATTCG TGCAGGCACT TTTGCCGCTT
ATGCAGGATT CCGGGTATCA GGTAGTCCTG ACGGGCAGTA AACAGGAGCA GTCGCTGACC
GGCCAGATTC AGCATCGGCT GGCCGGGCGG GCACTGGATT TGGCTGGTCA GCTCAGCCTG
GGCGAGTTGG CAGCTCTTCT GGCCGAAGCT CCGCTGCTCA TTGCCAATAA TACCGGCCCG
GTGCATATGG CGGCTGCGCT GGGAACGCCC GTTGTGGTGC TGTATGCCAA AACAAATCCG
CAGCATACGC CCTGGCAGGT ACCTAACCGG GTGCTTTATT TTGACGTTCC GGCCAATCTG
CGGTCGAAAA ATAAACTTTT ACAACAGTTT CCGGAGCCAG CGGAACCAAC TGCATCGCCC
GAGGCCATTG TCCGGGCGGT GCATGACCTC ATGGCTCAAT GGCAACCAAT CGCTTAA
 
Protein sequence
MNFWKDGLRL LCVRLDNLGD VLMTTPAFRA IKTTWPATHL TLLTSSAGAA VAELVPDIDQ 
VLSFDVPWVA GQQQQPDRVV ALADCLRGHN FDAAILFTVQ SQNPLPTAML CYLAGIPRVL
GYCRENPYQL ITDWVPDPEI LVATRHEVVR QLELVREIDC HTTNRRLSLT PSVADQQRVR
QQVANAGLDF QRPWLVVHPG VSEEKRRYPA EKFVQALLPL MQDSGYQVVL TGSKQEQSLT
GQIQHRLAGR ALDLAGQLSL GELAALLAEA PLLIANNTGP VHMAAALGTP VVVLYAKTNP
QHTPWQVPNR VLYFDVPANL RSKNKLLQQF PEPAEPTASP EAIVRAVHDL MAQWQPIA