| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3066 |
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| Symbol | |
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| ID | 8726818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3716022 |
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| End bp | 3717194 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | integrase family protein |
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| Protein accession | YP_003387876 |
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| Protein GI | 284037946 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0221886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.652565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAA TTCGTATTGA CGAAAAAGAA CCGACGCTGT TGGTGGTGTC ATTTTCCGAA
GATCCGGTCG GGAATAACTT AATACGAGAA ATAGCTGGTC GGCGCTGGAG CTATTCGCGT
CGGTGCTGGC TTCTGCCCAA TACGCGCGAT AGTGTAGTAA AAGTCGGCAA GCTTTTTGGC
AAAGCGTACT GCCGGTTCGA TGAAGCGGTA GTGCGGCTCT ATAAACCCGA TGCCAGCAGT
AAAGTGATCG AATCGGCGAC AAATCCGCTC TGGCCACCAC AACAGGCAAA CGCCCAATCA
AAACCGTTTC GGTATATGCC GCCTGTGTTG GAGTACGACC AGCACCCGAT TATCATTGCT
GGTTGTAATG CCCTCCAGAT CGGAAATTAT AGCTATAGGA CGCTTAAGAA TTATAAACAG
GCACTCATCG CCCTAATTCG ATATGCTGGT TCAATACCGC TTGATGAACT CACCAGGGCA
CAGTATCAGG CCTACTTATT GTTCCTGACC GAAAAAAAAC GACTGAGTAG TGCAACAATC
AATGTCCATA TCAATGCGTA CAAGTTTTAT CAGGAAAAAG TACTGCAACG CGACAAATTA
TATTTTGATA TTGATTATCC TCGTCAGCCA ACAAAGCTCC CGACCGTTTA TAGTGTAGAT
GAAGTGAGGG CGATAATTAA AGCGACTACA AGTCTGAAAT ATCGTACACT GTTCAGGTTG
ATTTACAGCA CTGGCCTACG GCTTAGCGAA GCGGCTCATT TGCATCTGGT CGATCTGGAC
CGCGATCGTA GACTTATTAC GGTTCGGGCT GGAAAGGGCA AAAAAGACCG GGTGGTTATG
CTGTCTGAAA AACTTGACCT GGATATTAAT ACCTACCTGA ATCAGTATAG ACCTCACCGT
TATTTATTCG AAGACGCCAG TACGAGAGAG CCAATTTCTA TCCGGACGAT TCAACAGGTT
TATAGCAATA CTGTTCGGTT TGCCGGAATT GTGAAGCGAG GAGGTATTCA TAGCCTTCGG
CATTCGTTCG CCACACATCT GCTGGAATCT GGTGTAGATA TCCGCCATAT TCAAGAACTC
CTGGGGCATG AAAGTATCCT GACAACCATG CGCTATACAC ACGTAACGGC CGACAAAATC
AGTAAGCTCA GAAGTCCGCT GGATGATTTA TAG
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| Protein sequence | MITIRIDEKE PTLLVVSFSE DPVGNNLIRE IAGRRWSYSR RCWLLPNTRD SVVKVGKLFG
KAYCRFDEAV VRLYKPDASS KVIESATNPL WPPQQANAQS KPFRYMPPVL EYDQHPIIIA
GCNALQIGNY SYRTLKNYKQ ALIALIRYAG SIPLDELTRA QYQAYLLFLT EKKRLSSATI
NVHINAYKFY QEKVLQRDKL YFDIDYPRQP TKLPTVYSVD EVRAIIKATT SLKYRTLFRL
IYSTGLRLSE AAHLHLVDLD RDRRLITVRA GKGKKDRVVM LSEKLDLDIN TYLNQYRPHR
YLFEDASTRE PISIRTIQQV YSNTVRFAGI VKRGGIHSLR HSFATHLLES GVDIRHIQEL
LGHESILTTM RYTHVTADKI SKLRSPLDDL
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