Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3063 |
Symbol | |
ID | 8726815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3712683 |
End bp | 3713549 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | protein of unknown function DUF323 |
Protein accession | YP_003387873 |
Protein GI | 284037943 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.238173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.329072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTAC ACCTTATTAC CCTTGGTACT TTTATCATCT TACTATTAAT TAGTGATATA GAATTTAGGG AGTTTGATTC TAAATTTTCA GAGTATAGAT GTGGGCAACC TGAGTTTGAT TCCTTGAATA AAGAATTTAA ATTTTTGGAT TTACCTTTTG CAACAATGAC TTATGTACCT GGTGGGACAT TTCAAATGGG GGACATTAGA AATGAAGGTG ACTTTGACGA GAAGCCGGTT CATACTGTTA CAGTAAGTTC ATTTTATATG GGGCAATATG AAATTACAAA TCGGCAAGCT GCGACTATTA CGGATGAAAA ACTTTACTAT TTTGGTACTT GCCTGGACTG TCCACTTGAA ACCATTAGCT GGGATGGCGT ACAACTCTTT TTACAAAAGT TAAATCAGAA AACTGGCCGC AAATATCGTT TACCAACAGA AGCTGAATGG GAGTACGCAG CTGGTGGCGG GTCTAAAAAA AGAACCCGAT TTGGAAACGG ACAAGACGTT TTAAAAATAA CGGAAGCTAA TACTTTGCTG TTGCAAAAAA CTCAACAAAA AGACTTTGAA TCTAAATCTG GATTTTATGT GCGACAGGTC GTTACAGTCG GAACTTTTGT ACCAAATGCA TTAGGTTTGT ATGATATGTC GGGGAACGTT TGGGAATGGT GTAATGATTG GTTTGGGGAT TATAATTCAA AGAGTCAAAA TAATCCTATT GGTCCTACAA CAGGTAAATA TCGTGTAGTG CGTGGTGGTG GTTCTACAGA GGAACCTGCC CATTGTCGCG TGTCAAACCG TCATGGTAAT GCGCCTTTTT TCAATAACAA AGCTAATGGA TTTCGGATTG CCACTTCTGT TCGATGA
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Protein sequence | MKLHLITLGT FIILLLISDI EFREFDSKFS EYRCGQPEFD SLNKEFKFLD LPFATMTYVP GGTFQMGDIR NEGDFDEKPV HTVTVSSFYM GQYEITNRQA ATITDEKLYY FGTCLDCPLE TISWDGVQLF LQKLNQKTGR KYRLPTEAEW EYAAGGGSKK RTRFGNGQDV LKITEANTLL LQKTQQKDFE SKSGFYVRQV VTVGTFVPNA LGLYDMSGNV WEWCNDWFGD YNSKSQNNPI GPTTGKYRVV RGGGSTEEPA HCRVSNRHGN APFFNNKANG FRIATSVR
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