Gene Slin_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3063 
Symbol 
ID8726815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3712683 
End bp3713549 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content38% 
IMG OID 
Productprotein of unknown function DUF323 
Protein accessionYP_003387873 
Protein GI284037943 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.238173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.329072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAC ACCTTATTAC CCTTGGTACT TTTATCATCT TACTATTAAT TAGTGATATA 
GAATTTAGGG AGTTTGATTC TAAATTTTCA GAGTATAGAT GTGGGCAACC TGAGTTTGAT
TCCTTGAATA AAGAATTTAA ATTTTTGGAT TTACCTTTTG CAACAATGAC TTATGTACCT
GGTGGGACAT TTCAAATGGG GGACATTAGA AATGAAGGTG ACTTTGACGA GAAGCCGGTT
CATACTGTTA CAGTAAGTTC ATTTTATATG GGGCAATATG AAATTACAAA TCGGCAAGCT
GCGACTATTA CGGATGAAAA ACTTTACTAT TTTGGTACTT GCCTGGACTG TCCACTTGAA
ACCATTAGCT GGGATGGCGT ACAACTCTTT TTACAAAAGT TAAATCAGAA AACTGGCCGC
AAATATCGTT TACCAACAGA AGCTGAATGG GAGTACGCAG CTGGTGGCGG GTCTAAAAAA
AGAACCCGAT TTGGAAACGG ACAAGACGTT TTAAAAATAA CGGAAGCTAA TACTTTGCTG
TTGCAAAAAA CTCAACAAAA AGACTTTGAA TCTAAATCTG GATTTTATGT GCGACAGGTC
GTTACAGTCG GAACTTTTGT ACCAAATGCA TTAGGTTTGT ATGATATGTC GGGGAACGTT
TGGGAATGGT GTAATGATTG GTTTGGGGAT TATAATTCAA AGAGTCAAAA TAATCCTATT
GGTCCTACAA CAGGTAAATA TCGTGTAGTG CGTGGTGGTG GTTCTACAGA GGAACCTGCC
CATTGTCGCG TGTCAAACCG TCATGGTAAT GCGCCTTTTT TCAATAACAA AGCTAATGGA
TTTCGGATTG CCACTTCTGT TCGATGA
 
Protein sequence
MKLHLITLGT FIILLLISDI EFREFDSKFS EYRCGQPEFD SLNKEFKFLD LPFATMTYVP 
GGTFQMGDIR NEGDFDEKPV HTVTVSSFYM GQYEITNRQA ATITDEKLYY FGTCLDCPLE
TISWDGVQLF LQKLNQKTGR KYRLPTEAEW EYAAGGGSKK RTRFGNGQDV LKITEANTLL
LQKTQQKDFE SKSGFYVRQV VTVGTFVPNA LGLYDMSGNV WEWCNDWFGD YNSKSQNNPI
GPTTGKYRVV RGGGSTEEPA HCRVSNRHGN APFFNNKANG FRIATSVR