Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3010 |
Symbol | |
ID | 8726761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3643977 |
End bp | 3647366 |
Gene Length | 3390 bp |
Protein Length | 1129 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387820 |
Protein GI | 284037890 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAA ATTTACTGCA ATTTCGACTG GCGCTCGTGC TAATCGGCAG TATTCTAATG GCTGTTCTCA GTGGGAATGC AGCCATAGCA CAGGTAACGA CGTCCGTTAT TAATGGGCTG GTAACGGACG ATAAAGGGGC GGCCTTACCG GGTGCTACCG TTGTTGCTGT GCATGAACCG TCGGGTAGCC GTTATGGTAC AACGACAAAC GCTTCGGGTC GTTATACGCT GCCGGGTGTG CGGGTAGGTG GTCCTTTCAG AATAACGGCC ACATTTGTAG GGTTCAAAGA TCAGGTAACC GAAGGTGTTT TCACTAACCT GGGTACGTCT TCGGATGTAA GTTTTAAAAT GGCTGATAAC AGCACGCAGT TATCAGAAAT CGTTGTTTCG GGTAATCAAA ATGGTATTAT CAGTTCCAAC CGGACCGGTG CTGCTACATC GTACGGCCGG GGAACGATCA ATACAATTCC AACTCTGGGT CGTACCATTG CTGATATTAC CAAATACAAT GCGTATGGTA ACGGTCAGTC GTTTGGTGGT CAGGATGCCC GTTTTAACAA TATTACGATT GACGGTGCTG TGTTCAATAA CGGTTTTGGC TTGGGCAACA GTGCTTCGGC TGGTGGCCGG ACGGGTACGA CTGCTGTATC GCTTGACGCG CTGGATGAAG TTCAGTTGAA CGTTGCTCCC TTTGACGTTC GTCAGACGGG TTTCTCGGGT GCCAGCATCA ACGCCGTGAC GCGTTCCGGT ACCAACGATT TTTCTGGCTC GGTTTATCAC CTGTTCAGAA ATAACAGCTT AGCCGGTAAA AAAGCTGACG GTAAAGATCT GCCACCGGTT ACGATTGATC AGAAAACAAC CGGTTTCCGG ATTGGTGGAC CGATCATCAA AAACAAACTG TTCTTCTTCG CTAACGTAGA GCAGTTCAAA AGCAGCCAGC CAGCTTTGGA TTGGGTAGTG AACCGCGGGG CGGGTACAAC CGGTAACGTA TCTCGGGTAA CGGAAGCTGA TCTGACCGAC TTGAATCAAT TCATGCAGTC GAAATTCAAC TACTCGCTGG GTGCTTTTGA TAACTTCAAC AATGACGTGA AAAGTACGAA AGGGCTGATT CGTCTGGACT ATAACATCAA CGACAATCAT AAACTGTCGG TACGTTACTC ACACCACGAT TCGGAGTCGG GACAGATTAT CAGTAATAGC AACAGTAGTA ACACCGCCGG TAATGGTAAC CGGACCAACT CTGCGCTGGC TATCTCCGGC GAAAACACGG GCTATATCAT TGCTGACAAC ACCCGGTCTG TTGCTGCTGA GTTAAACTCT ACGTTTGGAG GTAAATTTGC TAATAAGCTT GTTGCTACCT ACAATAAGCA AATTGAAGAC CGGACTTACA AAACGGGTAT CTTTCCAACG GTTGACATTT TAAAGGACGG AACGACCTAC ACGACGGTTG GTTTTGACCC ATTTACACCT AATAACAAGC TAAATTATTC GACACTGAAT ATCACGGATA ACTTCAGCTA TTTTGCGGGT AATCACACGC TGACACTTGG GTTATCGTAT GAGAAGTTTA CATCGAACAA CGTATTCTTC CCGGCTTCGA ATGGCGTTTA TGTGTATAAC TCAATTGCTG ACTTCAAAAC AGCCGCTCAA TATGCATTAG ATAATCCGAA CGCAACAACG TCGCCTGTTG CGGTGTCTCG GTATAACTTA CGTTATTCTT TATTGCCAGG TGGTGCAGAG CCGTTACAGA CATTGCACCG CAGTACCTAC AGTGCATACG TTCAGGATGA ATTCCAGGTA AGGCCAAATT TTAAACTGAC GGCTGGTATC CGGGCTGATC TGTTCGCGTA CGATAACTCG ACGGCGGCTG ATTTCAATAA CCCAATTGTT GCCCGCCTTA CGTTTAGGGA TGAGAATAAT GCCAATTATG GTGTTAATAC AGGTGCATTC CCCAAAGCAC GTTTGTTGAT TTCGCCCCGC GTTGGTTTCA ACTGGGATGT GAAAAATGAT AAAATGACCC AGATACGCGG AGGTAGTGGT TTCTTTGTAT CTCGTATTCC AGAAGTTCTG GTGTCTAACC AGCTTGGGAA TAATGGCGTG AATACAGCTT TAATTGCTGC TAATAATAGC ACCGCTTATC CATTCGTTAC TGATCCCAGC AGATTACCCG CTGCCGTAAG ACCTGATCCA GCCAATGTAA AACTGGAGAA TTTACAACCT TACGTTATCA ATGCTACGGA TCCCAACCTG AAGTACCCAC TTGTTTGGAA AACTAACCTG GCCATTGACC AACGGTTACC ATGGGGATTA GTTGGAACGC TTGAAGTGAT TTATAACAAG ACACTTCAGG GTCTGCGCTA TATCGACGCT AACCTGAAAG CACCGGATCG TACGCTTAGC GGTGCTGATA CCCGCGGTCG TTTCCCTGCG TCAGGAGTGG CTAGTTCGGG CACAGGTGCT AACAACACGG TTAACATAGC TCGTTTCTAT AACACGGCTA TTACAAATGC CTTTATTCTG AAAAACTCGA CTCAGGGTGA TGCGTATACC TTCACCGCTA AACTTGAGAA GCCAACATCG AATGGGTTTG GAGGTATGCT CGCCTACACC TATGGTCTGG CCAGAGATTT ACAATCGGTA GGTAGCACAG TACAGGCCAA CATCCCAACG GTACAGGGGC AGAATTACCT GGGTCTTTCA TTTGCTGACA ACGACCTGCG TCACCGGATC ATTGGTTACG TAAACTATCG GCTGAACTAC GGCGGGAAAT TCGGTGGATC GACAACCTTC ACCTTAGGTA CACAGTCGAC CAGCGGTTAC AAAGTATCGT ATGTTGTGGG TGGTGATCTG AACGGCGATG GTCAGACAAC AAACGATCTG ATTTATGTAC CGAAGACTGC TTCAGAATTG ACATTCGCAC CGTTAACAGT AGGTTCTGGT GCTACAGCAC AAACGTTCTC TCCAGAGCAA CAGCAAGCGG CTTTTGACGC TTATATCAAC AATAATGAAT ACCTGAAAAC TCGTCGTGGG CAGTATGCTG AGCGTAACGG TGGCTACTCT CCCTGGTTAA CGCGGTTTGA TTTTACCGCT ATTCAGGAGT TTTACATCGC AACGGGAGCT AAAGGCACAC GCCATACACT CCAGTTCCGG GCCGATATCC TGAACGTTGG TAACCTGCTC AACAACAAAT GGGGTGTAGG GTATGCGAAC ACGTCTACAC AGCCATTATC TCTGGTTTCT GGCACGCCTA ATGCTGCTGG TGTTCCTTCG TATCGTCTGG GTACACAGAA TGTAAACGGT CAGACGGTTC TGCTACAGGA TTCATTTGTG AAAAGTATTA CGATTGATAA CGTTTGGCAG GCACAGCTTG GCGTTCGTTA CTCATTCTAA
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Protein sequence | MSKNLLQFRL ALVLIGSILM AVLSGNAAIA QVTTSVINGL VTDDKGAALP GATVVAVHEP SGSRYGTTTN ASGRYTLPGV RVGGPFRITA TFVGFKDQVT EGVFTNLGTS SDVSFKMADN STQLSEIVVS GNQNGIISSN RTGAATSYGR GTINTIPTLG RTIADITKYN AYGNGQSFGG QDARFNNITI DGAVFNNGFG LGNSASAGGR TGTTAVSLDA LDEVQLNVAP FDVRQTGFSG ASINAVTRSG TNDFSGSVYH LFRNNSLAGK KADGKDLPPV TIDQKTTGFR IGGPIIKNKL FFFANVEQFK SSQPALDWVV NRGAGTTGNV SRVTEADLTD LNQFMQSKFN YSLGAFDNFN NDVKSTKGLI RLDYNINDNH KLSVRYSHHD SESGQIISNS NSSNTAGNGN RTNSALAISG ENTGYIIADN TRSVAAELNS TFGGKFANKL VATYNKQIED RTYKTGIFPT VDILKDGTTY TTVGFDPFTP NNKLNYSTLN ITDNFSYFAG NHTLTLGLSY EKFTSNNVFF PASNGVYVYN SIADFKTAAQ YALDNPNATT SPVAVSRYNL RYSLLPGGAE PLQTLHRSTY SAYVQDEFQV RPNFKLTAGI RADLFAYDNS TAADFNNPIV ARLTFRDENN ANYGVNTGAF PKARLLISPR VGFNWDVKND KMTQIRGGSG FFVSRIPEVL VSNQLGNNGV NTALIAANNS TAYPFVTDPS RLPAAVRPDP ANVKLENLQP YVINATDPNL KYPLVWKTNL AIDQRLPWGL VGTLEVIYNK TLQGLRYIDA NLKAPDRTLS GADTRGRFPA SGVASSGTGA NNTVNIARFY NTAITNAFIL KNSTQGDAYT FTAKLEKPTS NGFGGMLAYT YGLARDLQSV GSTVQANIPT VQGQNYLGLS FADNDLRHRI IGYVNYRLNY GGKFGGSTTF TLGTQSTSGY KVSYVVGGDL NGDGQTTNDL IYVPKTASEL TFAPLTVGSG ATAQTFSPEQ QQAAFDAYIN NNEYLKTRRG QYAERNGGYS PWLTRFDFTA IQEFYIATGA KGTRHTLQFR ADILNVGNLL NNKWGVGYAN TSTQPLSLVS GTPNAAGVPS YRLGTQNVNG QTVLLQDSFV KSITIDNVWQ AQLGVRYSF
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