Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3007 |
Symbol | |
ID | 8726758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3640761 |
End bp | 3641756 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Patatin |
Protein accession | YP_003387817 |
Protein GI | 284037887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGACA ACCCTACCCC GCCCCTTCCC CATCCGGCAG CTATTTCCAC CACGCCCCAG TCGTCCATGC GGGCTCTCGT CCTGGGCGGG GGGTCACTTA AAGGAGCATT TCAGGTAGGG GCCGTAATGG CTCTTTTCGA GTCAGGTTTT GTACCCGATC AGCTTTATGG TATTTCGGTG GGTAGTCTGA ACGCTACCTT TATTGCCCAC GAAGCTGCGC GTCAGCAAGC GGCAACCGGA CACGTTGACT GGGAAAAAGT CGGTAAGTTT TTAATTGAAT TCTGGATTCG GAACATCACA AAACCCGACG ATGTAGCCGT TATTCGTTCA CGCTTCCGAA TGGGATACGA TACGGTTATG AGCCGTTTTG ATGGCTTACT GGATAACTCT CCCATCCAGA ATCTGATTCG GAATACTATA GACGTTGAAG CGCTGAAAAC GGGGCCGGTA AAACTGAAAG TTGGGGCTGT CGATATTATC GAAGGCGACA TGTGCTATGC CGACGCCAAT GATCCTAATT TCCTGGATTA CGTCTATGCC AGCAGCTCAC TCCCGTTCCT GATGCCGGCC GTGCAAATCG GGGGCGACCA CCGACGGGCC TTTCTGGATG GCGGGCTACG CGAAGTGGCT CCACTGCGGG TAGCGATTGA AGATGGTGCC ACAGAAATTG CCTGTGTTGC GTGTCACGCC AAGAAAATCT ACAACGAAAA GTTCAATTAC CGAAACCTGC TGAACCTCAT GGACCGGGTA AAAGACATTA CGGTGAATCA ATTGGTAAAC AATGACATTG CCTGGGCCGA GCGCTTTGCC AGCCGGGAAC ACCTCCACGG GCGGGAACTG GACCTGACGA TCATTCGCCC CACCGAACCG CTTTCCCTTA ACCTGATGAA GTTTACCTCC GACGACATAG GCCGAATGAT CGTACAGGGA TATCAGGCCG GAACAGACAT GCTAAAGATA AATAGAAAGA AAGGGGGGCC GACTGTGCTT CCTTAA
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Protein sequence | MIDNPTPPLP HPAAISTTPQ SSMRALVLGG GSLKGAFQVG AVMALFESGF VPDQLYGISV GSLNATFIAH EAARQQAATG HVDWEKVGKF LIEFWIRNIT KPDDVAVIRS RFRMGYDTVM SRFDGLLDNS PIQNLIRNTI DVEALKTGPV KLKVGAVDII EGDMCYADAN DPNFLDYVYA SSSLPFLMPA VQIGGDHRRA FLDGGLREVA PLRVAIEDGA TEIACVACHA KKIYNEKFNY RNLLNLMDRV KDITVNQLVN NDIAWAERFA SREHLHGREL DLTIIRPTEP LSLNLMKFTS DDIGRMIVQG YQAGTDMLKI NRKKGGPTVL P
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