Gene Slin_2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2999 
Symbol 
ID8726750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3630942 
End bp3632633 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content50% 
IMG OID 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003387809 
Protein GI284037879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAGA CAAAGCTCAT CCCCCGCACT ACCGAAGCTC ACGAGCCCCC TTTACTTATA 
AAAAACCTGC TCGCGCAGTC ACTCAAGTAT GAGCCTCAGC GCGAAATAGT CTACCGGGAT
CTTTTCCGAA TGGATTACAC TCGGTTTAAT CAGCGTGTCA GGCAACTCGC GAACGTCCTG
ACCGATCTGA ACGTACAACC GGGCGACACA GTAGCTGTCC TCGACTGGGA TAGCCACCGA
TATCTTGAAT GCTTTTTGGG TGTAACCAGT ACCGGGGCCA TACTGCACAC GATAAATATC
CGGCTTTCGC CGTCGCAGAT TCTGTATACA ATGAATCACG CTCAGGACAA GGTCGTTTTC
ATCCACGAAG ATTTCCTTCC GATCCTGGCC GCCATAAAAC CTCAACTAAC CACCGTTGAA
ACGTATGTTA TACTCAGTGA TAAAGTATAC ACCGGTACCT CGGAGATTAA CTCACTTGCC
GAATTACCGG AGGGCTTTTC GGGCGAATAC GAAGCTTTGC TAAAAGGAGC TTCGGAGCAG
TACGAATTTC CGGACTTCGA CGAGAATACC TGGGCAACCA CCTTCTACAC AACCGGAACG
ACAGGCAATC CGAAAGGTGT CTATTTTTCA CACCGGCAAT TGTTCATGCA TACGATGGGC
CTCCTGACAT ATATCATCGG TTACGAAGCC ATGCCATTTA AAGGCTCTAC GGATGTTTAT
ATGCCCATTA CACCTATGTT TCACGTACAT GCGTGGGGAT TTCCATTTCT GGCAACGATG
ATGTCAGCAA AGCAGGTTTA TCCCGGCCGA TATGAACCGG AAGTGCTGCT TAAATTGCTC
ATCACCGAAG GCGTGACCCT GTCCCATTGT GTACCTACCA TCCTGAATAT GCTGGTGAGT
AGCCCGGCCG CACCCAAATT TAAACAGAAC CTTAGTCGGT GGAAAGTGCT TATTGGTGGC
TCGGCCCTCA CAAAAGGGCT TGCCAAAGCC GCAACAGAAC TGGGCATTAC GGTCATGTCA
GGCTACGGCA TGTCAGAAAC AGCTCCGGTT ATGGCAGTCG GTTATTTAAA TGAGCAGGAA
AAACAACTAT CGCCGGAGGA GCAGATTGAC CTACGGACTC GTGCCGGGCG GATATCGCCA
TTTATTGAGA TGCGGCTGAT GGATGACGAC GGCAATTTCG TTCCACATGA TGGCCATTCA
CTGGGTGAAA TTGTAGCCCG TGGCCCCTGG CTCACCCAGG GCTATTACGA AGATCCCGAA
CGAGGTGCTG ACCTCTGGAA AGGCGGCTGG CTTCATACAG GCGATGTAGC CAGTATCACG
CCCGACTATT GGGTAGTAAT TGCTGATCGC ACCAAAGACG TGATTAAGAC CGGGGGTGAA
TGGGTATCTT CGCTGGATAT GGAAGATGTT CTGTCGCAGA TCGAAGGGGT AGCTGAATCG
GCTGTTATCG GCTTGCCGGA CGACCGCTGG GGTGAGCGTC CACATGCAAT TATTGTTCAG
AAGCCAGGTT ACACCCTACA GGCCGAAGGC ATAAAAGCAG GTTTACAGGC TAAAGTTGAA
CGGGGCGAAC TGCACAAATG GTATGTTCCC GACCGTATAG TTTTTGTTAC AGAAATTCCT
AAAACCAGCG TTGGTAAAAT TGACAAAAAG AAGATACGCA GCGAGATGAA AGAGCTAATT
TTGGGAAAAT AA
 
Protein sequence
MIQTKLIPRT TEAHEPPLLI KNLLAQSLKY EPQREIVYRD LFRMDYTRFN QRVRQLANVL 
TDLNVQPGDT VAVLDWDSHR YLECFLGVTS TGAILHTINI RLSPSQILYT MNHAQDKVVF
IHEDFLPILA AIKPQLTTVE TYVILSDKVY TGTSEINSLA ELPEGFSGEY EALLKGASEQ
YEFPDFDENT WATTFYTTGT TGNPKGVYFS HRQLFMHTMG LLTYIIGYEA MPFKGSTDVY
MPITPMFHVH AWGFPFLATM MSAKQVYPGR YEPEVLLKLL ITEGVTLSHC VPTILNMLVS
SPAAPKFKQN LSRWKVLIGG SALTKGLAKA ATELGITVMS GYGMSETAPV MAVGYLNEQE
KQLSPEEQID LRTRAGRISP FIEMRLMDDD GNFVPHDGHS LGEIVARGPW LTQGYYEDPE
RGADLWKGGW LHTGDVASIT PDYWVVIADR TKDVIKTGGE WVSSLDMEDV LSQIEGVAES
AVIGLPDDRW GERPHAIIVQ KPGYTLQAEG IKAGLQAKVE RGELHKWYVP DRIVFVTEIP
KTSVGKIDKK KIRSEMKELI LGK