| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2927 |
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| Symbol | |
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| ID | 8726678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3531536 |
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| End bp | 3533395 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | glycoside hydrolase family 2 sugar binding protein |
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| Protein accession | YP_003387739 |
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| Protein GI | 284037809 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.817001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACA TTCAATCAAA CTTTGGCCTT GCCTCCAGTA AAGAAGAAAC ATCCCTTATT
GAAGACCCAA TAAATCCCTT ACCCAGAGCC GTATTACGGC CCAACACCCA CTGGCTGCTC
GATGGCGAGT GGCAGTTTGC CCTCGATCCT AAAGACACCG GCCTACGCGA CAGATGGTAC
CTGGGCCACG ACTATGATGG GGTGGCTCAG TGGCCGGGCT CGATAGAAGC GCACATGGCA
CGTGCCAAAG GCCAGAATGA TCCGGTAATA TGGCACGATA AAGTAATTGC CTGGTACGAG
CGCGAGTTTT CTCTTCCTGA ACGCAGCGAG CCGCTTTCCC GCTCCATCAT TCAGTTAACG
TTTGGTGCCT GCGGGTACGA AACGCGGGTG TGGCTCAACG GACACCCGCT AAGCACCATC
GAAGGAGACG AGGTGCATTA TGGCGAGTAT ACATCCTTTT CCTATGAACT GGCCGATGAA
TACCTCCGGC CCTCAAACCG CCTTACGGTA CGTATCGCGG ATACTATGGA TGCCGAAACC
CCACGCGGAA AACAGGAGTC TCACGTCTAC AAACGAGGAG GAATCTGGTA TCAGACGTAT
ACGGGTGCGG TGCGTTCCGT GTGGCTGGAA ACTGTTGAAC GAAACCGTTT GCGCTCCAGA
GTAGGGGTGG TCAGTACCAT TGAGGACCAC CTGGTTCGGT TTACGTTCAC GACTCGTATC
CATGATCCGG GCAATTATAT TCTACGGCTT CAGGTTTTTG AACGGAAGGC TCCTGAGTCA
GCCCCCCCGC TGGCAACGTC CGATTTTCCG TTGCGTCTCG AAGCCGGACA GAAGCAGCAG
CGGGTGTCGA TGGAAGTACC GGGTACCGAA CTCTGGTCGA CGGAAACACC GGTTCGCTAC
CGGCTCGTGG CTCAGTTGAT TGATGCCGAA GGGCACACTG CCCAGATCGA AACCCAGTTT
GGCCTTCGCA AAATAGAAGC CCGGGGCCGG TACGTGTATC TAAACAATAA GCCCATTTAT
CTCGATGGGA TTCTGTATCA GCCCGGCACG GCGACTTACG AAGAAATGAA GCGGCATATG
CAGGCCATGA AAGAATTAGG CTGCAATCTG GTTCGGGTAC ACATTGCCGG TATCGACCCC
CGAATTTATA ACCTGGCCGA TAAACTGGGC CTGTTGCTGT GGGTAGAAGT GCCCAGCCCA
CACAGCTCAA CGACCCGCAG CCGCCAGAAT CACCGGGCCG AGCTGATGCG GATGCTGGCG
CTGATCGGGA CGCACCCGTC GGTAGTGATC TGGAGCTTGT ACAATGAAGA CTGGGGGGCT
CAGGATATTG CGACTAATCC CGAAACCCGT GAGTACATTA TGAACATGTA CCATTTCATG
CAACTGGCCT ACCCGCAGTT TCTGGTTGTT GACAACGACG GCTGGCAGCA TATTTCGTTC
GAAGGACGGC TTAAGTCCGA TTTGCTCACG GCCCACTTAT ACACGCCCGA CCTGGGCCAT
TGGCAATCTC TCCTCGACCG GCTGGTTGCC GGAGATCTGG AAGCAGTCGC TGCCTTTCCG
CTGGTGGTGG GCGACCCGTT CTTCTACCGG CGTCAGGTTC CCCTGATCGT GAGCGAATGG
GGCGGCTTCG GCTTTGCCGA CTATGGCGGG CCGCAGGATG CCGAAGATCG TACCGAGCGT
ATCCGCCTGT TCAAGCAGGA GATGCGGAAA CGCTCCATCG CGGGGGATGT CTACACGCAG
GCTACCAACA TTGAAGACGA ACGCAACGGG CTGATCGACC CACAAACCGG CGAACTCAGC
GTACCGGCCG GATTGCTGGC TACCGGTGGC TACGAAAATA TGCCTAACAG ACCTCTATAA
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| Protein sequence | MSDIQSNFGL ASSKEETSLI EDPINPLPRA VLRPNTHWLL DGEWQFALDP KDTGLRDRWY
LGHDYDGVAQ WPGSIEAHMA RAKGQNDPVI WHDKVIAWYE REFSLPERSE PLSRSIIQLT
FGACGYETRV WLNGHPLSTI EGDEVHYGEY TSFSYELADE YLRPSNRLTV RIADTMDAET
PRGKQESHVY KRGGIWYQTY TGAVRSVWLE TVERNRLRSR VGVVSTIEDH LVRFTFTTRI
HDPGNYILRL QVFERKAPES APPLATSDFP LRLEAGQKQQ RVSMEVPGTE LWSTETPVRY
RLVAQLIDAE GHTAQIETQF GLRKIEARGR YVYLNNKPIY LDGILYQPGT ATYEEMKRHM
QAMKELGCNL VRVHIAGIDP RIYNLADKLG LLLWVEVPSP HSSTTRSRQN HRAELMRMLA
LIGTHPSVVI WSLYNEDWGA QDIATNPETR EYIMNMYHFM QLAYPQFLVV DNDGWQHISF
EGRLKSDLLT AHLYTPDLGH WQSLLDRLVA GDLEAVAAFP LVVGDPFFYR RQVPLIVSEW
GGFGFADYGG PQDAEDRTER IRLFKQEMRK RSIAGDVYTQ ATNIEDERNG LIDPQTGELS
VPAGLLATGG YENMPNRPL
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