Gene Slin_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2893 
Symbol 
ID8726644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3494989 
End bp3495630 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content51% 
IMG OID 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_003387705 
Protein GI284037775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAT CTATCAGCAA GTTACGGAAC GAGTACACTT TAAACGGGTT GGATGCGGTC 
GATGTTTTAC CAGATCCGGT TGCCCAGTTT AAGGAGTGGT TTGACGCTGC CCTTAGTGCG
GCCGTTCCAG AACCAAATGC CATGCACGTA AGCACCGTTT CGAAGGATGG TCGCCCGGAT
GGGCGGATTG TACTACTCAA AGATGTGTCA GATGCCGGTT TTGTTTTCTA TACAAATTAC
GAAAGCCGTA AAGGACGTGA ACTTACCGAA CATCCGTTCG CTACGCTTAC TTTTTTTTAT
CCCGAACTCG AACGGCAGAT TCGGATTGAA GGACGAGTAG AGAAAGTCGG CCCCTCAGAA
TCAGACGATT ACTTCCATAG CCGCCCGCGA GGAAGCCAGA TCGGAGCCTG GGTATCGAAT
CAGAGTACCG TCATTGAGAA CCGTGAAGTG CTCGAAAATC GACAGCGTGA ACTCATCGCA
CAGTTTGACG GTCAGCCTAT TCCACGCCCA CCGCACTGGG GCGGCTTCCG GGTTGTTCCC
GATATGATTG AATTCTGGCA GGGACGCCCC AGCCGACTTC ATGATCGTAT CCGGTACCGA
AAAGAAGCTG ACAACTGGCT GATCGAACGG TTGTCGCCTT AA
 
Protein sequence
MPSSISKLRN EYTLNGLDAV DVLPDPVAQF KEWFDAALSA AVPEPNAMHV STVSKDGRPD 
GRIVLLKDVS DAGFVFYTNY ESRKGRELTE HPFATLTFFY PELERQIRIE GRVEKVGPSE
SDDYFHSRPR GSQIGAWVSN QSTVIENREV LENRQRELIA QFDGQPIPRP PHWGGFRVVP
DMIEFWQGRP SRLHDRIRYR KEADNWLIER LSP