| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2884 |
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| Symbol | |
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| ID | 8726634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3485068 |
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| End bp | 3486765 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003387696 |
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| Protein GI | 284037766 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAC TGATTATCTA TCAGATTTTT ACCCGTCTGT TTGGCAATCA AAATACCACC
AACATATACA ATGGCACGTA TGCAGAAAAC GGTGCCGGTA AATTCAACGA TATCAACGAA
GCAGCCTTGC AGTCGATCCG TCAGTTTGGC GTTTCGCACG TCTGGTTTAC CGGAATAGTG
GAGCACGCTA CGCAAACCGA CTACTCAACG TTCGGTATTA AACCCGACGA CCCGGCAGTT
GTAAAAGGTC GGGCAGGCTC CCCCTATGCT GTTAAAGATT ATTACGACGT CGACCCTGAC
CTGGCGGTTG ATGTGCCCAA TCGAATGGCC GAATTTGAGG CCCTTGTTCA ACGTACCCAC
GCTCACGGCC TGAAAGTTAT CATCGACTTT GTCCCGAACC ACGTAGCCCG GCAATATGGG
TCGGATGCCC GGTCCGGTGA CGTTGTCGAT CTGGGTGAGA CCGACGATAC TTCGGTCCAT
TTTTCACCGA ACAACAATTT TTATTACCTG CCGGGTGAGC CCTTTGTTGC TCCGGAAGCC
GGGAACATAC CTCACGCTGG TTCACCTATT CACGAATACC CGGCCAAAGT GACCGGCAGC
GGCTCTATAA CGGCCCGGCC CGACATCAAC GACTGGTACG AAACCGTTAA GCTTAACTAC
GGTATCAATA TATTCGACGG GAGCCGTCAT TTCGATCCCA TTCCGGATAC CTGGCACAAG
ATGCTCGATA TTCTGTTTTT CTGGGCGGCT AAAGGAATTG ACGGGTTCCG ATGTGATATG
GCGCACATGG TTCCGGTCGA GTTTTGGCAC TGGGCCATTG GCCGGGTCAA ACAACGGTAT
CCCCGCCTGA TTTTCATCGC TGAAATTTAT GATCCCGGCC TTTACCGCTC TTTCATTTTT
GAAGGTGGGT TCGATTATCT CTACGATAAG GTAGGCCTAT ATGATGCGCT CCGGCGGCTT
ATGGAGGGCC ACGGCTCCTG CTACGAGCTA ACCCGTGTGT GGCAGCAGGA ATCGGGCGAT
TTCGCCCAGC ACATGCTCCG GTTTCTGGAA ACCCATGACG AACAGCGCAT TGCGTCGCGT
TTTTTTGCCA ACGACCCCTG GAGCGCTGTC CCTGCCATGA CGCTGACGGC CACCATGCAC
ACCGGCCCAA CGCTGCTTTA TTTCGGACAG GAAGTAGGGG TCCGGGCCGA AGGGTCGGAA
GGCTTCAGTG GCGATGATGG AAGGACGACC ATATTTGATT ACTGGGGGCT GACCGACTGG
CAGGGCTGGC TCAACAAAGG TCGCTATGAT GGAGCGGGAC TAACCGACGA CCAGCGGAAC
CTACGCTCTT TCTACCAACG GTTAAACCAC CTCGTAAACG GGTCCGATGC CATTCAGAAC
GGCTATTTCT ATGACCTACA ATACGTAAAC GATAATGGAC AGAGCACGGG TTACGATGCC
CATCGCGTAT ACAGTTACCT GCGGTACACA GATCGCCAGA AACTGTTGAT CGTCTGTAAT
TTTTCTCAGC ACCTAACGTA CGAAACCAAC ATCAAAATTC CAGAGGCAGC GTTCGATGCC
ATGGGTATAA ACCCTTCCAG AACGCTGCGG CTGAGCGATA TTTTCCTGAC AGATATGCAG
CTTGAAGCAG TTGGACGTAG CGGCATCCCC CTGGAGCTTC CTCCTCGTTG TGTGCGGGTG
CTGGAAATAA AATTGTAG
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| Protein sequence | MDKLIIYQIF TRLFGNQNTT NIYNGTYAEN GAGKFNDINE AALQSIRQFG VSHVWFTGIV
EHATQTDYST FGIKPDDPAV VKGRAGSPYA VKDYYDVDPD LAVDVPNRMA EFEALVQRTH
AHGLKVIIDF VPNHVARQYG SDARSGDVVD LGETDDTSVH FSPNNNFYYL PGEPFVAPEA
GNIPHAGSPI HEYPAKVTGS GSITARPDIN DWYETVKLNY GINIFDGSRH FDPIPDTWHK
MLDILFFWAA KGIDGFRCDM AHMVPVEFWH WAIGRVKQRY PRLIFIAEIY DPGLYRSFIF
EGGFDYLYDK VGLYDALRRL MEGHGSCYEL TRVWQQESGD FAQHMLRFLE THDEQRIASR
FFANDPWSAV PAMTLTATMH TGPTLLYFGQ EVGVRAEGSE GFSGDDGRTT IFDYWGLTDW
QGWLNKGRYD GAGLTDDQRN LRSFYQRLNH LVNGSDAIQN GYFYDLQYVN DNGQSTGYDA
HRVYSYLRYT DRQKLLIVCN FSQHLTYETN IKIPEAAFDA MGINPSRTLR LSDIFLTDMQ
LEAVGRSGIP LELPPRCVRV LEIKL
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