Gene Slin_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2873 
Symbol 
ID8726623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3472423 
End bp3473139 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387686 
Protein GI284037756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0739546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA AAAATCTGGT TAGCCTCTCC GTTTCAGCGG TGTTTTTCGT TCTGTCCATC 
ACGGGCCTGT TAATTTATTT CGGGCAGGGG GGTTACGTTG TCGACCATAC TCATGCCTGG
TTTGGTGTGC TGTTCTTTAT CGCTGCGGTC TTTCACATTA TCAATAACTG GTCGTCGATT
GTCGGGTATT CTAAAAGCCG CCGAACAGGC AGCATTCAAA AAGAACTGAT TATTCCGGTT
GTCATTGTCG CCATTTTCGC TGCGGGTATC GGGTTCGACG TACCTGTTTT CAAAAAGCTG
GGTAACGCCG GTAAAGACCT GGTGCGTGGC AGTCGGCCAA AAGGTGGCCC ATTGTCGCAA
ACTGCTGTCG ATTCTATCGC AAACGCCGTT GAGACTGCCT ACGCAACAGC TTACAGCAAA
GGAGACACGG GGGCTTTGGC GGCCGTAATG CCGGTCAAAA CGGCACTGTT GACTGAAGCG
GGAACGATAC TCAGCGGCTC AGATATACAA AAGAACCTAC TGGCCCGGAC AACCCCGGAA
GTTATCAAAA CAAAAGTTGA CCGGGCTGAA GCACTCGACG ACCGGACGAT TCTGGTTTAT
GGCACATCAA CAAATTCAAT CGCCACATCT CCTTCGGTAT ACTCACATAT TTTGAAGGAG
CAGGATAAAA AGTGGAAAAT AATTGCCGCC CAGCGGGCAT TTCCATCGGT ACAATAG
 
Protein sequence
MKSKNLVSLS VSAVFFVLSI TGLLIYFGQG GYVVDHTHAW FGVLFFIAAV FHIINNWSSI 
VGYSKSRRTG SIQKELIIPV VIVAIFAAGI GFDVPVFKKL GNAGKDLVRG SRPKGGPLSQ
TAVDSIANAV ETAYATAYSK GDTGALAAVM PVKTALLTEA GTILSGSDIQ KNLLARTTPE
VIKTKVDRAE ALDDRTILVY GTSTNSIATS PSVYSHILKE QDKKWKIIAA QRAFPSVQ