Gene Slin_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2704 
Symbol 
ID8726454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3272067 
End bp3274049 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content50% 
IMG OID 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003387519 
Protein GI284037589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00329778 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC ACTACTTTGT CATTTCCTTA TTCTCTTTGC TAAGTACCAT CGTGCTGGCT 
CAGTCGCCGT CCATCGATCA GGCTATTTCC ATGAAAAGTG TGAGTAACCC CAAAATCTCG
CCCGATGGCC AGTGGGTTGC GTACACGCTT ACGAGAACAA ACTGGGATGA AAACAGCTAC
GACACGGATA TCTGGCTCGT CAACATCCAG ACGGGCAATC GGTTCCAGCT CACCAACTCC
AAAAAATCGA ACAACAGCCC GGCATGGTCA CCGGATGGAA AATGGCTGGC ATTTCTTTCT
ACCCGCGACG ATAAACCGCA ATTGTACCTG ATTAGCCCTT CAGGGGGCGA AGCGCGGGCG
ATTTCCAAAT TTGAAACCGG AGTCACGGCC TTTAGATGGT CGCCGAATGG CAAACAAATC
GTCTTTACTG CGACAGTGCC GGACGCCAAA CCCGACAAAG AGCGTAAGGA AAAATACAGC
GATTATGAAG TAGTACGCGA CGACTACAAA ATGGTACACC TGTACTTGAT TGACAGCCTC
TTTAATGAGA AACCCGCATC CGCCAAGCCC CTCACCAGAG GTAAGGACTT TTCGGTAGGC
AACTTTGTCG TTTCTCCCGA CGGAAAGAAA ATAGCCTACG ATGCCGCCAG GAATCCCGAT
CTGATCAACG GCCATACGTC CGATTTATAC GTCTTGACAC TCGGGGATAC GATAAGTCGG
AAGATCGTTT CGCTGAAAGG GCCTGACCAG GACCCGGTCT GGTCGCCCGA TGGGAAGCAG
ATCGCTTTTG TGACAGCCAA CGAGAATGAG TTTTATTTTT ACACAAATCG ACTCATTGCA
ACAGTACCAG CCACGGGGGG AACGCCCACG ATGCTTACTA ACACCTTCGA CGAGAACGCT
AATTTACTGG ACTGGACACC GGATGGCATT TTGTTTAGCG GCTATCAGAA AACCAGCTCA
CACCTGTTTC GCCTTGACCC CGCAACCCAG AAAACCGAAC GCCTGACCAA ACCCGATAAT
CTGATCGCTA CGCAGTTTTC ATTCAGCAAA GATGGCCGCC AGATGGCCTT TGTGGGGGCT
ATGCCCAATA CATATGCCGA GATTCAGACC TCGTCCGTTC AGGCTTTTTC CCCCAGGACC
CTAACGGATA TGGGGGCTCA GGTAACGCCG TTTAAAATGT CGACCCGTGA AGTGATCAGT
TGGAAATCGG CAGACGGGAA TATGATCGAA GGAATTCTTA TCAAACCGGC CAATTACAAT
CCCTCACAAA AGTATCCCTT GCTGGTCGTT ATTCACGGCG GACCAACCGG TATTGATCTG
CCCTCGATCA CCGCCGACCG GTACTATCCC GTTGAGCAGT TCACGGCTAA AGGCGCGTTA
GTTTTACGAC CTAATTACCG GGGTTCGGCC GGGTACGGCG GTAAGTTTCG GGCTTTAAAT
GTGAAAAACC TCGGCCTGGG GGATTATGAC GATGTAATTA CGGGTGTTGA CTACCTGATC
AGTAAAGGCA TGGTTGACAA AGACAAGGTG GGCGCTATGG GCTGGAGTCA GGGAGGGTAC
ATTTCGGCAT TCATCACAAC CTACAGCGAC CGCTTCAAGG CGACGTCTGT TGGGGCGGGT
ATTTCAAACT GGGCTACCTA TTACCAAAAC ACGGACATCA CCCCTTTCAC GCGTCAGTAC
TTACAGGGAA CCCCCTGGGA CAATGCTGAA ATCTACCAGA AAACATCCCC AATCACCTAT
ATCAATCGTG CCAAAACCCC CACTCTGATT CAACATGGCG AACTGGACAA GCGCGTTCCC
ATCGCCAATG CATATGAGTT GCGGCTGGCA CTTGAAGATA AGGGCGTTCC GGTAAAAATG
GTTGTTTACA AAGGATTCGG TCATGGAATC ACCAAACCGA AGTCGATGCG GCAGGTTATG
GAAGAAAACT ACCGCTGGTT CAGTAAATAC ATTTGGGGCG AAACCTTTCT GAGTCAGAAT
TAA
 
Protein sequence
MKLHYFVISL FSLLSTIVLA QSPSIDQAIS MKSVSNPKIS PDGQWVAYTL TRTNWDENSY 
DTDIWLVNIQ TGNRFQLTNS KKSNNSPAWS PDGKWLAFLS TRDDKPQLYL ISPSGGEARA
ISKFETGVTA FRWSPNGKQI VFTATVPDAK PDKERKEKYS DYEVVRDDYK MVHLYLIDSL
FNEKPASAKP LTRGKDFSVG NFVVSPDGKK IAYDAARNPD LINGHTSDLY VLTLGDTISR
KIVSLKGPDQ DPVWSPDGKQ IAFVTANENE FYFYTNRLIA TVPATGGTPT MLTNTFDENA
NLLDWTPDGI LFSGYQKTSS HLFRLDPATQ KTERLTKPDN LIATQFSFSK DGRQMAFVGA
MPNTYAEIQT SSVQAFSPRT LTDMGAQVTP FKMSTREVIS WKSADGNMIE GILIKPANYN
PSQKYPLLVV IHGGPTGIDL PSITADRYYP VEQFTAKGAL VLRPNYRGSA GYGGKFRALN
VKNLGLGDYD DVITGVDYLI SKGMVDKDKV GAMGWSQGGY ISAFITTYSD RFKATSVGAG
ISNWATYYQN TDITPFTRQY LQGTPWDNAE IYQKTSPITY INRAKTPTLI QHGELDKRVP
IANAYELRLA LEDKGVPVKM VVYKGFGHGI TKPKSMRQVM EENYRWFSKY IWGETFLSQN