| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2691 |
|---|
| Symbol | |
|---|
| ID | 8726441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3258796 |
|---|
| End bp | 3259905 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_003387506 |
|---|
| Protein GI | 284037576 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.955062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.402733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA AAACTTTATT CCGCGTAGGG GGCGTTATTG TCCTAGTCAT TGCTCTCTTT
TTCGGGTACA GCGAGTTTCG GTACCTGCAA CGTCACGAAA CCACCGACGA TGCGCAGATT
GATGGCGACG TGAATCCGGT GATTCCCAAA GCCGGTGGAT ACGTGAAAGC GATTCGCTTT
AAAGACAACC AGTTTGTTAA GGAAGGCGAT ACGCTGGTCG TGCTGGACGA TGCCGATTAT
CGTATCCGGG TAGCTCAGGC CGAAGCCGCT TTGCAGAGTG CGATGGCAGC CGCCGGGGTG
TCTCGCTCGC AGGTGAGTGT TGCTTCGGCA ACGATACAAA GTTCTCAGGC TAGCGTACTG
ACGGCCCGGA ATCAGGTTGC TACAGCCCAG GCCAACGTGA CGGCTGCTCA GGCCCGCGCC
CGGAAAGCCA ATCAGGATTT TGAACGGTAT AGCCGCCTGC TGGCCGAAAA AACGGTTCCT
CAACAACAAT TCGACGCCGT ACAGGCCGAA CGGGATGCTG CTCAGGCTCA ATTACAAGCC
GCTCAGGCTC AACTCCAGAC GGCTCAGGCG CAGGTAGCTG CCGCCGGTAC GCAAACGGGT
GTTACCAGTT CGCAGCGCCG GGCAACGGAA GGTCAGATTT CGGTAGCACA GGCCGCTATC
AAACAACGGC AGACGGAACT GGATATGGCT AATCTTCAAC TGTCCTATAC CATTGTACGG
GCGCCGGTTT CGGGCGTGGT GTCGAAGCGG GCGGTGCAGG TCGGCCAACT CGTTCAACCC
GGTCAGGCGT TGTGTTCGAT TGTTGGTAAC ACGAGCCTTT GGGTTACGGC TAACTTCAAA
GAAACACAGT TGAAACAAAT GCAGCCCGGC CAAAAGGTTG AAGTCGATGT CGACGCCTTT
GAAGGCGATA AGCTGGTTGG CCAGGTGGGT TCGTTTGCCG GTGCAACGGG TGCCAAATTC
ACCCTGCTTC CTCCCGACAA CGCAACGGGT AACTACGTGA AAGTGGTACA ACGGGTTCCG
GTTCGTATCG AGCTGGATAA AAACAGCCCG CTTTACGCCC GGCTTCGTCC TGGGATGAGT
GCGACAGTAG CCGTGGATTT ACAGAAATAG
|
|---|
| Protein sequence | MNKKTLFRVG GVIVLVIALF FGYSEFRYLQ RHETTDDAQI DGDVNPVIPK AGGYVKAIRF
KDNQFVKEGD TLVVLDDADY RIRVAQAEAA LQSAMAAAGV SRSQVSVASA TIQSSQASVL
TARNQVATAQ ANVTAAQARA RKANQDFERY SRLLAEKTVP QQQFDAVQAE RDAAQAQLQA
AQAQLQTAQA QVAAAGTQTG VTSSQRRATE GQISVAQAAI KQRQTELDMA NLQLSYTIVR
APVSGVVSKR AVQVGQLVQP GQALCSIVGN TSLWVTANFK ETQLKQMQPG QKVEVDVDAF
EGDKLVGQVG SFAGATGAKF TLLPPDNATG NYVKVVQRVP VRIELDKNSP LYARLRPGMS
ATVAVDLQK
|
|---|
| |