| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2680 |
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| Symbol | |
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| ID | 8726430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3242301 |
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| End bp | 3245921 |
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| Gene Length | 3621 bp |
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| Protein Length | 1206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Glycosyl hydrolase family 98 putative carbohydrate binding module |
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| Protein accession | YP_003387495 |
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| Protein GI | 284037565 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.117789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGTCTG GTAAACAGTC TACAGCTTTC GGACAAACCA CGTATTACGT TGCCAACACT
GGCAACGATT CGAATTCAGG TCGGTCGAGC GATGCTCCCT ACCAAACGAT CAGCAAAATC
AACAGCCTTT CTCTGCAACC GGGTGATCAG GTTTTGTTTC GGCGCGACGA CACATTTACG
GGCAATCTAC AAATCAAACA GTCCGGCACG AGCGACAAAC CCATTGTCGT GGATGCGTAT
GGTTCTGGCA ACAAGCCGGT TCTTACCGGA GCCGTGGGCG TTACTGCCTG GACAAACATT
GGTAATAATA CGTGGCAGGC ACTCTGCCCA TCCTGCGGAA GCCGGGTTAC GGGTTTGTAC
CGCAACAACA CGAGTCTGCC CCTGGGGCGT TACCCAAACC TGGACGCAGC GAATAAAGGC
TACCTGACGG TGCAATCGCA CACGGGTAAA ACCCAGTTGA CCAGCCAGCA GTCGTTACTG
GCAAACTGGC TGGGGGGCGA GGTCGTCTAT CGTCCGGTGC AGTGGATTCT AAATCGCGCC
ACCATTACTG GTCAGACGGG CAACAGCCTG ACCCTGCTGG GCTCGGGCAA TTATGACATC
AGTGATAACT GGGGCTTCTT TATCCAGAAT CATCCCAACA CCCTCGACCA AACCGGCGAG
TGGTACTACA ACCCATCCAC AAAAACGATT CAGTTGTACG ACAACCAGAC GAATCCCAAC
ACTCAGAAAA TAACGGCTAC GGTTTTTTCT GATATCATTA CCGTATCAGG GGTATCGTTC
ATAACGATTC GTAACCTCCA GCTTACCCAG GCGCTGTCGT CCAACCTGAC CGTAACCAAT
AGCTCAAATC TGGTCATAAG CGGGAATGAC CTGACAAAAT CCGGTGAAGA TGCGCTGCTG
GTTAAGGGAA GCGGGCAGCA GTTGTTAATT GAAAATAACC TCATCGAAGA TGCTAATAAC
AATGGGGTTG ATATCGGCAC TTACCAGAAC GTCACATTCC GTGGGAACAT CATTCGGCGT
GTTGGACTGA TACCCGGGCG GGGGAAGAGC GGGGACGGGA CGTATGTAGG CTTTCTGTCG
GCAACGACGG CCAACATGCT CATTGAAGAT AACACCCTGG ATAATATCGG CTATAACGCG
CTGAACTTCT CGGCGAACAC TACTATTCAG CGTAACCAGA TCAGCAATTT CTGTCTGACG
AAAAGCGATG GCAGCGGTTT GTACATCTGG AACGGCAATC AACTACCCAT GGCCAATATT
CGTCTGGTCG CCAACACAGT AACAAACGGA ATTGGGGCTC CGGAAGGAAG CCCGGCGGGT
AGTTCCTCTG GAGCCAATGG CATTTATCTC GACGATTGCA CGACGAATAT CGAAGTAAGT
GGCAACACGG TTGGGCATTG CAAGGGCCTC GGTATTTTCC TGCATGGTTC TTCCAACATC
ACTCTGAGCG GAAACACGTC TTTTAACAAC AATGAGGGAC AACTGGCCAT TATGAGTGCC
AACGGCTGTC AACCCCGGAA TAACATCATT CAGAACAATA TTCTTGTTAG CCGACTAGCC
AGCCAGTTTC TGGTCAAATA CGAATCAAAT CAGAATGATT TGGGCAGTTA CGGTGAATTC
AACAACAACG TTTATGCCCG TCCTTTCGAT GATGTGTATA AAATTCTAAC GGTTTATAAC
CGAAACATTG GTGCCAGCCT GTCGATGGCG CAGTGGCAAA CCCAATATGG CAAAGACCTG
ACATCGAAAA ACAGTCCCAT CACCTATTCG TCCGGTAACG CGGATGATTA TTTGAAGCTA
TTGACAAACC CAACCGCTAA CCCGGTTCAG GTACCGCTCA CTGGCACCTA CCGCGATGCG
CGAAATACGA TCTGCACCAA TCAGGTAACC ATTCCCGCCT ACGCATCCGT CGTTCTCTTT
AAAGATAACA CCCCCGTTGT CTCGTTACGT GATCCGGAAA ATCCGACCAA TACCATTGCC
GGGCTTGATT ATCAGTATTT TGAAGGCAGT TGGAGCACCA TGCCCGATTT CAACGCGCTG
ACCACCAGTA AAACGGGAGC CGTTTCCAGC CCGGATTTAT CCGTTCGTAA CCGCACCGAC
AATTTCGGCA TTCGATTCAA AGGGTACATC AACGTACCTG CCGATGGGGT CTATACTTTT
TATACCAGCT CTGATGATGG CAGCAAATTA CTCATCGGCA ACACCGAAGT GGTGAACAAC
GACGGCGTAC ATGCAGCCAT TGAAAAAGCA GGCACAATTG GCTTGAAAGC CGGCAAACAC
GCTCTAACAG TTTTGTATTT TCAGGGCGGT GGAGGACAGG CCCTAAGCGT CAGCTACGAG
GGGCCGGGTA TTGGCAAACA AGCGATTCCG GCAACAGCCT TATATCGGAT ACCAACCAGC
ACGAGTGGGC AAGGGAGTGG TACCGGTCTT ACTGGTACCT ATTTCAATAA CGTTACCCTT
ACGGCTCCGG CTTCACTGAC CCGCACCGAT GCCACGGTAA ACTTCGACTG GGGCACCGGC
TCCCCCGCTG CCGGAACCAT AGGCACTGAT AATTTTTCGG TTCGCTGGAC CGGACAGGTC
GAAGCACCCG TTACGGGCAA TTATACCTTT AGCACAACAT CGGATGATGG CGTTCGGCTT
TGGGTGAACG GCGCACAGGT CATTAATAAC TGGACCGTTC ATGCGCCAAC AACGAACAAC
AGCCCGGTTG TTGCCCTAAC CGCCGGTCAA CGGTATACGA TTCAGATGGA GTATTACGAC
GGAGGTGCGG GTGCGGTAGC GAAGCTGTTA TGGGCATACC CCGGTCAGAC CCAGCAGCCT
GTCCCCCAAA GCTATTTGTA TCCACCTGTA TCGAGTACTA CACCAATGGC AACCCCACCA
ACCTCGGCTA CGGGCACCGG CATTTATTTA TCTGACCTCA ACTGGACATC AGCAACAAAT
GGCTACGGAC CGGTGGAGAA AGACCAGAGC AATGGCGAAA ATAACGCGGG CGACGGCAAA
ACAATCACCC TGAACGGCGT AACCTATGCA AAGGGGCTTG GCGTACATGG CCTCGCGACT
ATTACCTATG CATTGAATGG TCAGTATAGC CGCTTCCTGA CAGACATTGG CCTCGACGAT
GAGGTCAGCA CCTGCGGAAC AGTGAGCTTT GACGTTTACC TCGACGATGT ACTGGCGTAC
AGCAGTGGCG TAATGGGCCC AACGACGGCC ACAAAATCAA TCGACCTCAA CGTGTCGGGC
AAGCAAACCC TTAAATTGGT TGCCACAAAC GGGGGCGATG ATGCTTCCTG CGACCACGGC
GACTGGGCTG GTGCCCGCCT GATTAGTACC AGTGGTGCCC GCGTGGCCAA CCCCGAGTTG
TTCCGGGAAT CACGCATGAA CGCTTACCCC GTACCCGCCA AAGAGGTGAT GTGGGTGAAG
TATTATGCCG AAACAGCCGG AGACGCAACG GTCCAACTGG TCAATATGAT GGGGCAGCCA
GTCCATCAGG CAACCCATCA GCTTATTCAG GGCGAGAATC TCCTTAAAGT TATGGTCGAT
CAATACAACC GCGGAAGTTA TATCCTGATG CTGACAAAAG ACCAGCAGCG GCAAACCCAA
AGAGTCATTC TTATCGATTA A
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| Protein sequence | MLSGKQSTAF GQTTYYVANT GNDSNSGRSS DAPYQTISKI NSLSLQPGDQ VLFRRDDTFT
GNLQIKQSGT SDKPIVVDAY GSGNKPVLTG AVGVTAWTNI GNNTWQALCP SCGSRVTGLY
RNNTSLPLGR YPNLDAANKG YLTVQSHTGK TQLTSQQSLL ANWLGGEVVY RPVQWILNRA
TITGQTGNSL TLLGSGNYDI SDNWGFFIQN HPNTLDQTGE WYYNPSTKTI QLYDNQTNPN
TQKITATVFS DIITVSGVSF ITIRNLQLTQ ALSSNLTVTN SSNLVISGND LTKSGEDALL
VKGSGQQLLI ENNLIEDANN NGVDIGTYQN VTFRGNIIRR VGLIPGRGKS GDGTYVGFLS
ATTANMLIED NTLDNIGYNA LNFSANTTIQ RNQISNFCLT KSDGSGLYIW NGNQLPMANI
RLVANTVTNG IGAPEGSPAG SSSGANGIYL DDCTTNIEVS GNTVGHCKGL GIFLHGSSNI
TLSGNTSFNN NEGQLAIMSA NGCQPRNNII QNNILVSRLA SQFLVKYESN QNDLGSYGEF
NNNVYARPFD DVYKILTVYN RNIGASLSMA QWQTQYGKDL TSKNSPITYS SGNADDYLKL
LTNPTANPVQ VPLTGTYRDA RNTICTNQVT IPAYASVVLF KDNTPVVSLR DPENPTNTIA
GLDYQYFEGS WSTMPDFNAL TTSKTGAVSS PDLSVRNRTD NFGIRFKGYI NVPADGVYTF
YTSSDDGSKL LIGNTEVVNN DGVHAAIEKA GTIGLKAGKH ALTVLYFQGG GGQALSVSYE
GPGIGKQAIP ATALYRIPTS TSGQGSGTGL TGTYFNNVTL TAPASLTRTD ATVNFDWGTG
SPAAGTIGTD NFSVRWTGQV EAPVTGNYTF STTSDDGVRL WVNGAQVINN WTVHAPTTNN
SPVVALTAGQ RYTIQMEYYD GGAGAVAKLL WAYPGQTQQP VPQSYLYPPV SSTTPMATPP
TSATGTGIYL SDLNWTSATN GYGPVEKDQS NGENNAGDGK TITLNGVTYA KGLGVHGLAT
ITYALNGQYS RFLTDIGLDD EVSTCGTVSF DVYLDDVLAY SSGVMGPTTA TKSIDLNVSG
KQTLKLVATN GGDDASCDHG DWAGARLIST SGARVANPEL FRESRMNAYP VPAKEVMWVK
YYAETAGDAT VQLVNMMGQP VHQATHQLIQ GENLLKVMVD QYNRGSYILM LTKDQQRQTQ
RVILID
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