Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2676 |
Symbol | |
ID | 8726426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3237961 |
End bp | 3239016 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | HtrA2 peptidase |
Protein accession | YP_003387491 |
Protein GI | 284037561 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0673345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATGC AATTTGTGGC CCTTTCCAGC GATACTTCGC AGACAGGTCA GGAAACATCG CCTGATTCAA TGCTTCTGGA CGCTTATTCC AATACGGTCG TAAATGTAGC CAAAAAAGTC AGCCCATCGG TAGTACAGAT TAAGGTTACA AAACAACTCA TCGCGTCAGC ACCCGGTCGG CAGCGTCAAT CTCCCCTTCC AGGACACCCG CCTGGCCGCG ACCGCATGGA AGGCGGCTCG GGCTCGGGTT TCATCATTTC CAGCGATGGC TATATCATCA CAAACAACCA TGTTGTGGCC GGAGCGTTGA CGATCAAGGT CCATCTGGCC GACTCCCGTG AATACGACGC CACCCTGATT GGCCGTGATC CGGACACCGA CATTGCCGTT TTGAAAATCT ACGCCGATAG TCTGAAAGCC ATTCGCTTTG CCGATTCAAA GCACTTACAG GTTGGCCAGA TCGCCATAGC TGTAGGGAAT CCCTACGGGT ATCAGTATTC GTTAACGGCC GGTGTGGTGA GTGCACTGGG CCGAACGCTG CGGTCGGAGT CGGGGCGGTT AATTGACGAC GTTATTCAAA CGGATGCGGC CCTTAACCCC GGCAATTCGG GTGGTCCGCT GGTCAACTCG CAAGGCGATG TCATTGGTGT AAATACGGCC GTAATTTTGC CCGCCCAGGG TATTTGCTTT GCCGTTTCCT CCAATCTGGC CGCATTGGTA GCGGGCAAGC TGATTATGAC CGGACGCGTT CGACGGGGCT ATCTCGGCAT GGCCGGGCAG TTAATTAACC TTACCGAGCG GATTATGCAG TACAATCAAC TGGCTGCAAA AACGGGTGTT ATGGTCGTGA GTGTCGAACC GGACGGCGTG GCCGGTAATA GTGAACTTCG GGAAGGCGAT ATCGTAGTGG GCTTTGCAGA ACAGCCCGTA ACATCGGTTG ACGACCTTCA TCGGCTGTTG ACCGATGATA CCATTGGGCG GAAGCTACCG CTGATCGTTC TCCGCGGAAA TCTAAAGAAA ACGATTTTCG TTACCCCCGG CGAATTAACA AAATAG
|
Protein sequence | MNMQFVALSS DTSQTGQETS PDSMLLDAYS NTVVNVAKKV SPSVVQIKVT KQLIASAPGR QRQSPLPGHP PGRDRMEGGS GSGFIISSDG YIITNNHVVA GALTIKVHLA DSREYDATLI GRDPDTDIAV LKIYADSLKA IRFADSKHLQ VGQIAIAVGN PYGYQYSLTA GVVSALGRTL RSESGRLIDD VIQTDAALNP GNSGGPLVNS QGDVIGVNTA VILPAQGICF AVSSNLAALV AGKLIMTGRV RRGYLGMAGQ LINLTERIMQ YNQLAAKTGV MVVSVEPDGV AGNSELREGD IVVGFAEQPV TSVDDLHRLL TDDTIGRKLP LIVLRGNLKK TIFVTPGELT K
|
| |